| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2238 |
|---|
| Symbol | |
|---|
| ID | 6283881 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 2521783 |
|---|
| End bp | 2522439 |
|---|
| Gene Length | 657 bp |
|---|
| Protein Length | 218 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642621795 |
|---|
| Product | glycosyl transferase family 2 |
|---|
| Protein accession | YP_001895861 |
|---|
| Protein GI | 187924219 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGGCG TGATCGTTCC GGCGCATAAC GAAGAGGCGT TGCTCGCGTC TTGTCTCGCT
GCCTTGATCG CTGCTTCGCG CCATGAGGAT CTGGCGGGCG AAACGGTGCG CATCGTGGTC
GTGCTCGACG CATGCGACGA CTTCAGCGGC GCGATCGCGC GGGCCTACGG CGTCGAGACG
CTCACGCTGA AGGCGCGCAA CGTCGGCATT GCGCGCGCGA CCGGCGCGGA CTTCCTGCTC
GCGGACGGCG CGCGCTGGCT CGCGTTCACC GATGCCGACA GCCGCGTCTC GTCAGGCTGG
CTGGTCGCGC AGCTTTCGCT GGATGCGGAC GCAGTGTGCG GTTCGATTGC AGTCGACGAC
TGGACCGCGC ATCCGCACAG CGTGCGCGAA TATTTCCGCA AGACTTACGT GGATGCAGAC
GGTCATCGTC ACATTCACGG CGCGAACCTC GGCGTGTCGG CCGATGCCTA CCGGCGCGCG
GGCGGCTTTC CGCCTCTCAA ATGCAGCGAG GATGTCGCGC TGGTCGACCG GCTCATCGCG
ATCGGCGCGC GCATCGCGTG GAGCGCGGCG CCGCGCGTCA TTACGAGCGC GCGCGCAGCG
GCCCGCGCTC GGGGCGGCTT CGGCGATACG CTTGCTTCGT GGGCGGCGGC CGGATAA
|
|---|
| Protein sequence | MIGVIVPAHN EEALLASCLA ALIAASRHED LAGETVRIVV VLDACDDFSG AIARAYGVET
LTLKARNVGI ARATGADFLL ADGARWLAFT DADSRVSSGW LVAQLSLDAD AVCGSIAVDD
WTAHPHSVRE YFRKTYVDAD GHRHIHGANL GVSADAYRRA GGFPPLKCSE DVALVDRLIA
IGARIAWSAA PRVITSARAA ARARGGFGDT LASWAAAG
|
|---|
| |