Gene Bphyt_2233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_2233 
Symbol 
ID6281632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp2516081 
End bp2518675 
Gene Length2595 bp 
Protein Length864 aa 
Translation table11 
GC content66% 
IMG OID642621790 
Productprotein of unknown function DUF470 
Protein accessionYP_001895856 
Protein GI187924214 
COG category[S] Function unknown 
COG ID[COG0392] Predicted integral membrane protein
[COG2898] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCATC GATATAACTA TAAATTCGAC CGGCTAGGCG CGATGTTCGA CCGGGCGTCG 
AAAACGCTCG GCAACCGGGC ACTTCTCTCG CCCCTGCTCG CGCTTGGAAT TGGCGCGTTG
CTGCTGGTCG TCTTGCAACA CCTCTCGCAA GCAGTCGACT ATCGCTCGGT GATGCGCGAG
TTGCGTCGAC TGACGGCCGG CGAATGGAGC GCCGCGCTCG GCGCCACCGC GCTCAGCTAC
GTGGCGCTGG TCGGCCGCGA TGCCGTCGGG TTGCGCTATC TGGGCGCGGC CGTGCCGCGT
GTGGCGCTGT GGATCGGCGC GACGGCGGGC TCGGCGCTGG GCAACGCCAC CGGTTTCGGC
GCGCTGACCG GAGGCGCCGT GCGCGCGCGG GTCTACAGCG TGGCGAGCGT CACGCCCGCG
CAGATCGGCC GCATGACGGT GTTCACGAGC GTGTCGCTCG CGCTCGCACT GGTGCTGATG
ACGGCGCTCG GCATGGTCGG CGTGGCCGGC ACGCTCGCAC CGATGCTGCA TCTCGAACCG
CTTACGCTGC GTTGGACCGG CGTGGCGCTG CTCGCCGCGC TCGCCTCGGC GGCGGCCGCC
TGCCGCGGCG AAACGCGCCC GGTGCGCACG CGCTGGCAGT GGCTCTCGTT CGATATCCCC
GCACGCCGCG ATCTGCTCGC GCAAGTGGCG CTCGCGGTGC TCGATGTGGT GGCCGCCGGC
CTCGCCTTGT GGGCGCTGCT GCCACATGCG GACGTGAGCT TTGTGACCTT CATCACGGTG
TACGCCGCGG CCATGCTGCT CGGCATGATC GGCCACACGC CCGGCGGCGT CGGCGTGTTC
GAAGCAGCGA TGGTGTTCAC GCTGAACGGC AGCGTGCAAA CGCATCAGAT GGTTGCGGCC
TTGCTCGCGT ATCGCGCGAT TTACTTCGGT GTCCCGTTGA TCGTTTCGGC CGCGCTGCTC
GCCGGATTCG AAGGGCGCGC GCTGAAAAGC CGTTTGCCGC TGCAACATGC CGCTGCGGCG
TCGAAGCTCG CGCCGCTGTT TCTGAGTCTC GTCACCTTCG TGGTCGGCGG CATGCTGGTG
ATTTCCAGCG CGACGCCCGC GTTCTGGCAA CGCATTCACA TGCTGCGCAA CGTGCTGCCG
CTGTGGGTGC TCGAAAGTTC GCAGATGCTT TGCAGCGTGC TGGGCGTGCT GCTGCTGTTC
GTCGCGCGTG GTTTGCTGCG GCGCCTGGAC GCCGCGTGGT GGATGACGCT TCTGCTGGCG
GTGCTGAGTC TCGCGTTGTC GCTGACCAAA GGTCTCGCGT TCGTGGAAGC CGGCGTGCTC
GGCATGCTGG TCGTGTTGCT GCTGTCCACG CGCAGGCGTT TCAACCGTCA TTCGTCGCTG
TTCGCGGAGC GCTTCACGGC GGGCTGGCTG GTGTCGGTCG CGATGGTGCT GATGCTGGCC
ACCTGGGTCA TGCTGTTTGC TTTCCGCGAC GTGCCGTACA CGCGCGACCT GTGGTGGCAA
TTCGCCTTCG ACGAACGCGC GCCGCGTGCA TTGCGCGCGA CGCTGGCCGC GAGCCTGTTC
GCTGCGACGT TCTCGTTCTG GCAGCTGCTG CGTCCCGCGC CGGGGCGCTT CGTCAAACCT
GCGCCGCAAG ATCTGCACGA CGCGGCGCGC ATTGTGCGCG CGCAGGAACG CAGCGACGCC
GGTCTCGCAC TGATGGGCGA CAAGAGCTTC CTGTTCTCCG AGTCGCGCAA GGCTTTCCTG
ATGTACGCGA AATACGGCCG CACGTGGGCC GCTTTGCACG ATCCGGTGGG TCCGCGCGAA
GAGTGGGCCG GTCTGATAGG CAAGTTCGTC GCGCTCGCGC ACACGCACGG CGGCCGCGCT
GCGTTCTATC AGGTGCGCGC GAACGCATTG CCGCTTTACC TCGATGCCGG CCTCACGCTG
ATGAAGCTCG GCGAGGAAGC GCACGTCGTG CTCGACGATT TCGACCTGAA GGGCTCGCAT
CGCGCGCATC TTCGCTATGC GTTAAAGCGT GGCGAGCGCG ATGGCTTCAC CGTCGAAGTG
ATCGATCAGG CGAACGTGCC CGCGTCGCTC GACACGTTGC GCGAGATTTC CGACGGTTGG
CTCGACAGCC GCGACGCGCG CGAAAAGAGC TTCTCGGTGG CCGCCTTCAC GGACGAATAT
CTCGCCGCGC AATCGGTGAT GCTGGTGCGT CAGAACGGCG AGCCCGCTGC TTTCGTCACT
TTCATGACGA CCGACATGAA CACCGAGGCG ACCGTCGGCG TGATGCGTCA TGTGGAAAGC
GCGTCGCCGT ATGCAATGGA ATATCTGTTC ACGCAACTGG CGCTGCATCT GAAGCAGGCG
GGATTCCGCT CGCTCAGTCT CGGCATCGCA CCGCTCTCCG GCATGCAGCC CACGCCGCTG
GCGTCGCGCT GGCACCGGTT CGCCGGCATC GTATGGCGCT TCGGCGGCCG TTTCTATAAC
TTCCGCGGAC TGCGTGCTTT CAAAAGCAAG TTCCAGCCGC ATTGGGAGCC GCGCTATCTC
GCGGCGTCGG GTTCGGTCGG CGTGTTCTTC ACGCTCGCGG ACCTGTCATT GCTGGCAGGA
GGCCGGCGTT CATGA
 
Protein sequence
MFHRYNYKFD RLGAMFDRAS KTLGNRALLS PLLALGIGAL LLVVLQHLSQ AVDYRSVMRE 
LRRLTAGEWS AALGATALSY VALVGRDAVG LRYLGAAVPR VALWIGATAG SALGNATGFG
ALTGGAVRAR VYSVASVTPA QIGRMTVFTS VSLALALVLM TALGMVGVAG TLAPMLHLEP
LTLRWTGVAL LAALASAAAA CRGETRPVRT RWQWLSFDIP ARRDLLAQVA LAVLDVVAAG
LALWALLPHA DVSFVTFITV YAAAMLLGMI GHTPGGVGVF EAAMVFTLNG SVQTHQMVAA
LLAYRAIYFG VPLIVSAALL AGFEGRALKS RLPLQHAAAA SKLAPLFLSL VTFVVGGMLV
ISSATPAFWQ RIHMLRNVLP LWVLESSQML CSVLGVLLLF VARGLLRRLD AAWWMTLLLA
VLSLALSLTK GLAFVEAGVL GMLVVLLLST RRRFNRHSSL FAERFTAGWL VSVAMVLMLA
TWVMLFAFRD VPYTRDLWWQ FAFDERAPRA LRATLAASLF AATFSFWQLL RPAPGRFVKP
APQDLHDAAR IVRAQERSDA GLALMGDKSF LFSESRKAFL MYAKYGRTWA ALHDPVGPRE
EWAGLIGKFV ALAHTHGGRA AFYQVRANAL PLYLDAGLTL MKLGEEAHVV LDDFDLKGSH
RAHLRYALKR GERDGFTVEV IDQANVPASL DTLREISDGW LDSRDAREKS FSVAAFTDEY
LAAQSVMLVR QNGEPAAFVT FMTTDMNTEA TVGVMRHVES ASPYAMEYLF TQLALHLKQA
GFRSLSLGIA PLSGMQPTPL ASRWHRFAGI VWRFGGRFYN FRGLRAFKSK FQPHWEPRYL
AASGSVGVFF TLADLSLLAG GRRS