Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_2233 |
Symbol | |
ID | 6281632 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 2516081 |
End bp | 2518675 |
Gene Length | 2595 bp |
Protein Length | 864 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642621790 |
Product | protein of unknown function DUF470 |
Protein accession | YP_001895856 |
Protein GI | 187924214 |
COG category | [S] Function unknown |
COG ID | [COG0392] Predicted integral membrane protein [COG2898] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCCATC GATATAACTA TAAATTCGAC CGGCTAGGCG CGATGTTCGA CCGGGCGTCG AAAACGCTCG GCAACCGGGC ACTTCTCTCG CCCCTGCTCG CGCTTGGAAT TGGCGCGTTG CTGCTGGTCG TCTTGCAACA CCTCTCGCAA GCAGTCGACT ATCGCTCGGT GATGCGCGAG TTGCGTCGAC TGACGGCCGG CGAATGGAGC GCCGCGCTCG GCGCCACCGC GCTCAGCTAC GTGGCGCTGG TCGGCCGCGA TGCCGTCGGG TTGCGCTATC TGGGCGCGGC CGTGCCGCGT GTGGCGCTGT GGATCGGCGC GACGGCGGGC TCGGCGCTGG GCAACGCCAC CGGTTTCGGC GCGCTGACCG GAGGCGCCGT GCGCGCGCGG GTCTACAGCG TGGCGAGCGT CACGCCCGCG CAGATCGGCC GCATGACGGT GTTCACGAGC GTGTCGCTCG CGCTCGCACT GGTGCTGATG ACGGCGCTCG GCATGGTCGG CGTGGCCGGC ACGCTCGCAC CGATGCTGCA TCTCGAACCG CTTACGCTGC GTTGGACCGG CGTGGCGCTG CTCGCCGCGC TCGCCTCGGC GGCGGCCGCC TGCCGCGGCG AAACGCGCCC GGTGCGCACG CGCTGGCAGT GGCTCTCGTT CGATATCCCC GCACGCCGCG ATCTGCTCGC GCAAGTGGCG CTCGCGGTGC TCGATGTGGT GGCCGCCGGC CTCGCCTTGT GGGCGCTGCT GCCACATGCG GACGTGAGCT TTGTGACCTT CATCACGGTG TACGCCGCGG CCATGCTGCT CGGCATGATC GGCCACACGC CCGGCGGCGT CGGCGTGTTC GAAGCAGCGA TGGTGTTCAC GCTGAACGGC AGCGTGCAAA CGCATCAGAT GGTTGCGGCC TTGCTCGCGT ATCGCGCGAT TTACTTCGGT GTCCCGTTGA TCGTTTCGGC CGCGCTGCTC GCCGGATTCG AAGGGCGCGC GCTGAAAAGC CGTTTGCCGC TGCAACATGC CGCTGCGGCG TCGAAGCTCG CGCCGCTGTT TCTGAGTCTC GTCACCTTCG TGGTCGGCGG CATGCTGGTG ATTTCCAGCG CGACGCCCGC GTTCTGGCAA CGCATTCACA TGCTGCGCAA CGTGCTGCCG CTGTGGGTGC TCGAAAGTTC GCAGATGCTT TGCAGCGTGC TGGGCGTGCT GCTGCTGTTC GTCGCGCGTG GTTTGCTGCG GCGCCTGGAC GCCGCGTGGT GGATGACGCT TCTGCTGGCG GTGCTGAGTC TCGCGTTGTC GCTGACCAAA GGTCTCGCGT TCGTGGAAGC CGGCGTGCTC GGCATGCTGG TCGTGTTGCT GCTGTCCACG CGCAGGCGTT TCAACCGTCA TTCGTCGCTG TTCGCGGAGC GCTTCACGGC GGGCTGGCTG GTGTCGGTCG CGATGGTGCT GATGCTGGCC ACCTGGGTCA TGCTGTTTGC TTTCCGCGAC GTGCCGTACA CGCGCGACCT GTGGTGGCAA TTCGCCTTCG ACGAACGCGC GCCGCGTGCA TTGCGCGCGA CGCTGGCCGC GAGCCTGTTC GCTGCGACGT TCTCGTTCTG GCAGCTGCTG CGTCCCGCGC CGGGGCGCTT CGTCAAACCT GCGCCGCAAG ATCTGCACGA CGCGGCGCGC ATTGTGCGCG CGCAGGAACG CAGCGACGCC GGTCTCGCAC TGATGGGCGA CAAGAGCTTC CTGTTCTCCG AGTCGCGCAA GGCTTTCCTG ATGTACGCGA AATACGGCCG CACGTGGGCC GCTTTGCACG ATCCGGTGGG TCCGCGCGAA GAGTGGGCCG GTCTGATAGG CAAGTTCGTC GCGCTCGCGC ACACGCACGG CGGCCGCGCT GCGTTCTATC AGGTGCGCGC GAACGCATTG CCGCTTTACC TCGATGCCGG CCTCACGCTG ATGAAGCTCG GCGAGGAAGC GCACGTCGTG CTCGACGATT TCGACCTGAA GGGCTCGCAT CGCGCGCATC TTCGCTATGC GTTAAAGCGT GGCGAGCGCG ATGGCTTCAC CGTCGAAGTG ATCGATCAGG CGAACGTGCC CGCGTCGCTC GACACGTTGC GCGAGATTTC CGACGGTTGG CTCGACAGCC GCGACGCGCG CGAAAAGAGC TTCTCGGTGG CCGCCTTCAC GGACGAATAT CTCGCCGCGC AATCGGTGAT GCTGGTGCGT CAGAACGGCG AGCCCGCTGC TTTCGTCACT TTCATGACGA CCGACATGAA CACCGAGGCG ACCGTCGGCG TGATGCGTCA TGTGGAAAGC GCGTCGCCGT ATGCAATGGA ATATCTGTTC ACGCAACTGG CGCTGCATCT GAAGCAGGCG GGATTCCGCT CGCTCAGTCT CGGCATCGCA CCGCTCTCCG GCATGCAGCC CACGCCGCTG GCGTCGCGCT GGCACCGGTT CGCCGGCATC GTATGGCGCT TCGGCGGCCG TTTCTATAAC TTCCGCGGAC TGCGTGCTTT CAAAAGCAAG TTCCAGCCGC ATTGGGAGCC GCGCTATCTC GCGGCGTCGG GTTCGGTCGG CGTGTTCTTC ACGCTCGCGG ACCTGTCATT GCTGGCAGGA GGCCGGCGTT CATGA
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Protein sequence | MFHRYNYKFD RLGAMFDRAS KTLGNRALLS PLLALGIGAL LLVVLQHLSQ AVDYRSVMRE LRRLTAGEWS AALGATALSY VALVGRDAVG LRYLGAAVPR VALWIGATAG SALGNATGFG ALTGGAVRAR VYSVASVTPA QIGRMTVFTS VSLALALVLM TALGMVGVAG TLAPMLHLEP LTLRWTGVAL LAALASAAAA CRGETRPVRT RWQWLSFDIP ARRDLLAQVA LAVLDVVAAG LALWALLPHA DVSFVTFITV YAAAMLLGMI GHTPGGVGVF EAAMVFTLNG SVQTHQMVAA LLAYRAIYFG VPLIVSAALL AGFEGRALKS RLPLQHAAAA SKLAPLFLSL VTFVVGGMLV ISSATPAFWQ RIHMLRNVLP LWVLESSQML CSVLGVLLLF VARGLLRRLD AAWWMTLLLA VLSLALSLTK GLAFVEAGVL GMLVVLLLST RRRFNRHSSL FAERFTAGWL VSVAMVLMLA TWVMLFAFRD VPYTRDLWWQ FAFDERAPRA LRATLAASLF AATFSFWQLL RPAPGRFVKP APQDLHDAAR IVRAQERSDA GLALMGDKSF LFSESRKAFL MYAKYGRTWA ALHDPVGPRE EWAGLIGKFV ALAHTHGGRA AFYQVRANAL PLYLDAGLTL MKLGEEAHVV LDDFDLKGSH RAHLRYALKR GERDGFTVEV IDQANVPASL DTLREISDGW LDSRDAREKS FSVAAFTDEY LAAQSVMLVR QNGEPAAFVT FMTTDMNTEA TVGVMRHVES ASPYAMEYLF TQLALHLKQA GFRSLSLGIA PLSGMQPTPL ASRWHRFAGI VWRFGGRFYN FRGLRAFKSK FQPHWEPRYL AASGSVGVFF TLADLSLLAG GRRS
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