Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_2231 |
Symbol | |
ID | 6281630 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 2512895 |
End bp | 2514469 |
Gene Length | 1575 bp |
Protein Length | 524 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642621788 |
Product | threonine dehydratase |
Protein accession | YP_001895854 |
Protein GI | 187924212 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1171] Threonine dehydratase |
TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.485473 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTCGTTAC ACCAACTCAA ACAGGTGGCC GAAGCCGCCG ATAGCGTCGC GCTGCGCCAC GACTACCTGA AAAAAACCCT GACCGCGCGC GTCTACGACG TGGCCCGCGA GACCGAACTC GAACGCGCGC CGAATCTGTC GGCACGTCTG CGCAATCCGG TCTATCTGAA GCGCGAGGAC AACCAGCCGG TGTTCTCGTT CAAGGTGCGC GGCGCGTACA ACAAAATGGC GCATATTTCC GCTGAAGCGT TGGAACGTGG GGTGATTACG GCGTCGGCGG GCAATCATGC GCAGGGCGTG GCGCTGTCGG CGGCGCGTAT GGGCGTGAAA GCGATCATCG TGGTGCCGGT TACGACGCCG CAGGTGAAGG TCGACGCGGT GCGCGCGCAC GGCGGCCCGA CCGTCGAAGT GGTGCAGTTC GGCGAATCGT ATAGCGACGC GTATGAGCAC GCAGTAAAGC TGCAAAAAGA GCGCGATCTG ACCTTCGTGC ATCCGTTCGA CGATCCGTAT GTGATCGCCG GCCAGGGCAC CGTGGCGATG GAAATTCTCA GCCAGCATCA GGGGCCGATT CACGCGATCT TCGTGCCGAT CGGCGGCGGT GGACTGGCGG CGGGTGTGGC TGCATACGTG AAATCGGTGC GGCCCGAGAT CAAGGTGATC GGCGTGCAGA CCGATGATTC GTGTGCAATG GCAGCATCGC TGAAAGCCGG TGAGCGGGTC ACGCTGAATG AGGTCGGTCT GTTCTCGGAC GGCACGGCGG TGAAACTCGT CGGTGAAGAA ACCTTCCGCC TGTGCAGCGA ATATCTCGAC GACGTGCTGC TCGTGAATAC CGACGCGCTC TGCGCCGCGA TCAAGGACGT CTTCCAGGAC ACCCGCAGTG TGCTGGAGCC CGCGGGCTCG CTGGCCGTGG CCGGCGCCAA GCAGTATGCG GAGCGCGAAG GCATCGAGAA CCAGACGCTG ATCGCGATCA CGTCGGGCGC GAACATGAAT TTCGACCGCA TGCGCTTCGT GGCCGAGCGC GCCGAAGTCG GCGAAGCGCG CGAAGCGGTG TTCGCCGTGA CGATCCCCGA AGAGCGCGGC AGTTTCCGCC GCTTCTGCGA ACTGGTCGGC ACACGCAGCG TCACCGAATT CAACTATCGT ATTGCGGATG CGAACTCCGC CCATATCTTC GTGGGCGTGC AGATCAGGAA TCGCAGCGAG TCGGCGCAGA TCGCGGGCGC GTTTGAAGCG CACGGCTTCG CCACCGTCGA TCTGACGTTC GACGAACTCT CCAAGCAGCA CATCCGCTAC ATGGTCGGCG GGCGCTCGCC CTTGGCACAC GACGAACGTC TGTTCCGCTT CGAGTTTCCC GAACGGCCAG GCGCGCTGAT GAAATTCCTT TCGTCGATGG CGCCGAACTG GAACATCAGC CTGTTCCACT ATCGCAACCA GGGCGCGGAC TATAGCTCGA TTCTGGTCGG CATCCAGGTG CCGGATAGCG AGAACGAGGC GTTCAACAAG TTTCTCGCCA CGCTCGGCTA TCCGAACTGG GAAGAGACGC AGAACCCGGT GTATCGACTG TTTCTTGCGT CGTAG
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Protein sequence | MSLHQLKQVA EAADSVALRH DYLKKTLTAR VYDVARETEL ERAPNLSARL RNPVYLKRED NQPVFSFKVR GAYNKMAHIS AEALERGVIT ASAGNHAQGV ALSAARMGVK AIIVVPVTTP QVKVDAVRAH GGPTVEVVQF GESYSDAYEH AVKLQKERDL TFVHPFDDPY VIAGQGTVAM EILSQHQGPI HAIFVPIGGG GLAAGVAAYV KSVRPEIKVI GVQTDDSCAM AASLKAGERV TLNEVGLFSD GTAVKLVGEE TFRLCSEYLD DVLLVNTDAL CAAIKDVFQD TRSVLEPAGS LAVAGAKQYA EREGIENQTL IAITSGANMN FDRMRFVAER AEVGEAREAV FAVTIPEERG SFRRFCELVG TRSVTEFNYR IADANSAHIF VGVQIRNRSE SAQIAGAFEA HGFATVDLTF DELSKQHIRY MVGGRSPLAH DERLFRFEFP ERPGALMKFL SSMAPNWNIS LFHYRNQGAD YSSILVGIQV PDSENEAFNK FLATLGYPNW EETQNPVYRL FLAS
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