| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2207 |
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| Symbol | |
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| ID | 6281328 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 2490845 |
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| End bp | 2491615 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642621765 |
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| Product | 2-deoxy-D-gluconate 3-dehydrogenase |
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| Protein accession | YP_001895831 |
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| Protein GI | 187924189 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01832] 2-deoxy-D-gluconate 3-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCTTGA ACATCGTGAA TCCCTTTGAT CTTTCCGGCC GCGTCGCGAT CGTCACCGGC
AGCAATACGG GCCTCGGCGC CGGCATGGCC GTCGCACTCG CCGCAGCGGG TTGCGACATC
GTCGGCGTGA GCCGCGCCGA CGCCGGCGAC ACCGCCGCGC GCGTCGAAGC ATGCGGACGG
CGCTTCGCGG ACGTGCGCGC CGATCTCGGC TCGATTGCGC CGGTCGAGGA CATCGTGCGC
GCCGCGCTCG AAGCGTTCGG CCGCGTCGAC GTGCTGGTGA ATAACGCGGG CATCATCCGC
CGCGAGAACG CGCTCGATTT CACCGAAGCC GACTGGGACG CCGTGGTGGA CGTCAATCTG
AAGAGCCTGT TCTTTCTCTC ACGGGCCGCC GCGCGACAGT TCGTGAAGCA GAAAAGCGGC
GGCAAGATCA TCAACGTCGC GTCGATGCTG TCGTTCCAGG GCGGCATCCG CGTCGCGTCC
TACACGGCGT CGAAAAGCGG TGTGCTGGGG CTCACGCGGC TGCTCGCGAA CGAATGGGCC
GCGCAAGGCA TCAACGTCAA TGCGATTGCG CCGGGCTACA TGGCAACCGC GAACACGGCG
GCGCTGCGCG ACGACGCCCA GCGCAACGAC GAGATTCTCA GCCGCATTCC GGCCGCCCGC
TGGGGCACGC CGGACGATCT CGCGGGACCG GTGGTGTTCC TCGCGTCGCC GGCTTCGGAC
TACGTGCATG GGCATACACT GGCGGTAGAC GGCGGCTGGC TCGCGCGCTG A
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| Protein sequence | MGLNIVNPFD LSGRVAIVTG SNTGLGAGMA VALAAAGCDI VGVSRADAGD TAARVEACGR
RFADVRADLG SIAPVEDIVR AALEAFGRVD VLVNNAGIIR RENALDFTEA DWDAVVDVNL
KSLFFLSRAA ARQFVKQKSG GKIINVASML SFQGGIRVAS YTASKSGVLG LTRLLANEWA
AQGINVNAIA PGYMATANTA ALRDDAQRND EILSRIPAAR WGTPDDLAGP VVFLASPASD
YVHGHTLAVD GGWLAR
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