Gene Bphyt_2206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_2206 
Symbol 
ID6281327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp2489968 
End bp2490804 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content62% 
IMG OID642621764 
Product5-keto-4-deoxyuronate isomerase 
Protein accessionYP_001895830 
Protein GI187924188 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3717] 5-keto 4-deoxyuronate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGTGA GACAGGCCAT CAATAGCGAC TACGCGAAGA CGCTCGATAC CGACGGGCTA 
CGCAAGGCGT TTCTGGTCGA TCAGGTGTTC GAGCGCGATG CGCTGAAGCT GACCTATAGC
CATATCGACC GGATCATCGT CGGTGGCGTG ATGCCGGTGG CGCGCGCGGT GGAGGTGCCC
AGTTCGCTCG GCAAGTCGAT CGGCGTGAGC TATCTGCTGG AGCGGCGCGA ACTCGGCGCG
ATCAACATCG GCGGCGACGG CTGGGTCGAC GTGGACGGCA CGCGCCACAC GGTGCGCAAC
GAAGAGGCGA TCTACATCGG CCAAGGCACG CAAGCCATCG CCTTCGGCAG CGACGACGCC
GCGCGTCCGG CGAAGTTTTA CCTGAACTGC GCGCCCGCCC ACACGTCGTA TCCGACTCGC
ACGATCTCGC TCGCGCAAGC CTCGCCGCAA ACGCTCGGCG ACCCGGCCAC GAGCAATCGC
CGCACCATTT ACAAGTTCAT CGTTCCCGAA GTGCTGCCCA CCTGCCAGCT TTCCATGGGC
ATGACGAAAC TCGAACCGGG CAGCCTGTGG AACACCATGC CGTGCCATAC GCACGAACGC
CGCATGGAGG TGTATTTCTA CTTCAACGTC GCCGACGACG CCGCCGTCTT TCACATGATG
GGCGAGCCGA ACGAGACGCG GCATATTCTC GTGCACAACG AGCAGGCGGT GATTTCGCCG
AGCTGGTCGA TTCACTCCGG CGTCGGCACG CGGGCGTACA CGTTCATATG GGGCATGGTC
GGCGAAAACC AGGTGTTCGG CGATATGGAT CACATCGCAG TGCGGGATTT GCGTTGA
 
Protein sequence
MEVRQAINSD YAKTLDTDGL RKAFLVDQVF ERDALKLTYS HIDRIIVGGV MPVARAVEVP 
SSLGKSIGVS YLLERRELGA INIGGDGWVD VDGTRHTVRN EEAIYIGQGT QAIAFGSDDA
ARPAKFYLNC APAHTSYPTR TISLAQASPQ TLGDPATSNR RTIYKFIVPE VLPTCQLSMG
MTKLEPGSLW NTMPCHTHER RMEVYFYFNV ADDAAVFHMM GEPNETRHIL VHNEQAVISP
SWSIHSGVGT RAYTFIWGMV GENQVFGDMD HIAVRDLR