Gene Bphyt_2205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_2205 
Symbol 
ID6281326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp2488673 
End bp2489698 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content66% 
IMG OID642621763 
Product2-keto-3-deoxygluconate permease 
Protein accessionYP_001895829 
Protein GI187924187 
COG category 
COG ID 
TIGRFAM ID[TIGR00793] 2-keto-3-deoxygluconate transporter 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTCA AGAAGGCCAT CGACCGCATT CCTGGCGGCC TGATGCTGGT GCCGTTGCTG 
CTCGGCGCCT GCGTCCACAC ATTTGCGCCG GGCGCGGGCA AGTACTTCGG CTCGTTCACC
AATGGCTTGA TCTCCGGCAC CGTGCCGATT CTGGCGGTGT GGTTCTTCTG CATGGGCGCG
ACCATCGATC TGCGGGCGAC CGGCACGGTG CTGCGCAAGT CGGGCACGCT GCTGGTGACG
AAAATGCTCG TGGCGTGGAT CGCGACGATC GTCGCCTCGC ACTTCATTCC AATCGACGGC
GTCAAGGCCG GGCTGTTCGC GGGCCTCTCC GTGCTGGCGA TCACGACCTC GATGGACATG
ACCAACGGCG GCCTCTACGC GGCCGTGATG CAGCAATACG GCACCAAGGA GGAGGCGGGC
GCGTTCGTGC TGATGTCGGT CGAATCGGGG CCGCTCGTCA GCATGATCAT TCTCGGCGCG
ACCGGTGTGG CGTTCTTCGA GCCGCGTCTG TTCGTCGGCG CGGTGCTGCC GTTTCTGGTC
GGCTTCACGC TGGGTAATCT GGACGGCGAG CTGCGCGAGT TCTTCGGCCG TTGCGTGCAT
CCGCTGATTC CGTTCTTCGG CTTTGCGCTC GGTAACGGCA TCGACCTCGG CGTGATCGTG
AAAAGCGGCC TGCCGGGGAT CGTGCTGGGT CTCGGCGTGA TCGTCGTGAC GGGTATTCCG
CTGATTTTCG CGGATCGCTG GATCGCCGGC GGCAATGGCG CGGCGGGGCT GGCGGCTTCG
TCGACGGCGG GAGCCGCGGT GGCGAATCCG GCGATCATCG GCGAGATGAT TCCGAGCTTC
AAGCCGCTGG TGCCGGCCGC CACCGCGATG GTCGCGACGG CGTGTCTCGT GACCGCGATT
CTGGTGCCGA TCCTCACGGC GATGTGGGTG CGCCGGCATC ATGCGCGCGA TGCGTTACGC
GAGGAGTTCG CGGCGGGCGC GGCAGGCAGT GCGCCGCCGC TGAATGAACG GGATGTGCAT
GTGTAG
 
Protein sequence
MKLKKAIDRI PGGLMLVPLL LGACVHTFAP GAGKYFGSFT NGLISGTVPI LAVWFFCMGA 
TIDLRATGTV LRKSGTLLVT KMLVAWIATI VASHFIPIDG VKAGLFAGLS VLAITTSMDM
TNGGLYAAVM QQYGTKEEAG AFVLMSVESG PLVSMIILGA TGVAFFEPRL FVGAVLPFLV
GFTLGNLDGE LREFFGRCVH PLIPFFGFAL GNGIDLGVIV KSGLPGIVLG LGVIVVTGIP
LIFADRWIAG GNGAAGLAAS STAGAAVANP AIIGEMIPSF KPLVPAATAM VATACLVTAI
LVPILTAMWV RRHHARDALR EEFAAGAAGS APPLNERDVH V