Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_2198 |
Symbol | |
ID | 6282423 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 2480414 |
End bp | 2481817 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642621756 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001895822 |
Protein GI | 187924180 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGGGCG CCTCCATTCG CCGGCGTCTC GTGCTGCTGG TGCTGACCAG CATCGCGCTG GTCTGGGGCG TTGCGCTGGT GTCGAGTTAT CGTCAGGCCA CCCGCGAAGT CGCCGAATGG GAAGAGGCGC GCCTCGCGGA ACTCGCGCAG ATTCTCGCCC TGCTCGATCA GCCCAACCTG AGCACGCTCG CCAACGCGCG CATCGACGTG CGCGAGGAAG AAAAAGGCGG CGAGCCGGGC GCCAACGACC GCGACGACGA CGACGCGCTG CCGCGCGACG CGCTATTCCA GGTGCGCGGC CCGAACGGCG CGGTGCTGGC GGGCAGTCCG CAACTGCACG AACTCAAGGC CTGGGATCTG CCGGTGCCGG CGGTGAGCGG CACGCAGGAC ATCACGCTCG GCGGCCAGAT GTATCACTCG TTCACCTTGC GCGATACCGC GCTCGGCCAC ACGGTGCGCG TCTTCGAACC GGCCAATACG CGCAGCGATC TGGTGAGCGG CGTCGCGAGC CGCATCGCCC GTCCTACCCT GGTCGCGCTG CCGGTGCTGG CGGTGCTGGT GTGGTTCAGC ATTGGCTGGA GTCTGGCGCC GCTCAGGCTG CTCTCGCGCG CCATCCGTGC GCGCGATGTG AACCGGCTGG AACCGGTCGA CATCGGCCGC GCGCCGACCG AGGTGCGCCC GCTCGTCGAT GCGATCAATC TGCTGCTGTC GCGTCTGCTG CATTCGCTGG AGCGCGAACG CGCGTTTACC GCCGATGCCG CCCATGAACT GAAAACGCCG CTGGCCGCGA TCAAGGTGCA GGCGCAAGTC GCGCTGGCGG AAACGGAAAC GGCGCGCCAG CGGCTGGCGA TGGAGCGCGT GGTGCAAGGC GTCGACCGCA GCGCGCGGCT CGCGGAGCAA TTGCTGCTGC TCGCGCGTCT GGACGTGCAT GAAAAAATTT CAACCGCGCC GCTCAAGCCG GCAACGGTGG CCAAAGACGC GCTGCTCGCC AACGAGCGCA ATGCGCAGCA GAAAGACATT CACGTGACGC TGCTCGGCGA CCTGCGCGCC GAGATCGACG CGGAGCCGGT GCTGATCGGC ATCCTGCTCG ACAATCTGCT CGATAACGCG ATCAAGTACG GACACGCCGG CGGCAGCATC GAAGTGGCGG TGCAGCACGC ACAGGACCGC GTGCAGGTGA CCGTGCGCGA CGACGGCCCC GGTGTCGAGG CGGGCGACCT CGACCGTCTG ACGAATCGTT TTTTTCGTGC GACCGGCAAT CAGGCCACCG GCAGCGGGCT GGGTCTGTCG ATCGTCGCGC GGATCGCGGA GCATTTCGGC GCGAGCCTGC ATCTGGGTAA AGGCATCGGC GAGCGCGGGC TCGCGGTCGA AGTGTCGTTC CCGGCTTACG CGCAGGCGAG TTGA
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Protein sequence | MMGASIRRRL VLLVLTSIAL VWGVALVSSY RQATREVAEW EEARLAELAQ ILALLDQPNL STLANARIDV REEEKGGEPG ANDRDDDDAL PRDALFQVRG PNGAVLAGSP QLHELKAWDL PVPAVSGTQD ITLGGQMYHS FTLRDTALGH TVRVFEPANT RSDLVSGVAS RIARPTLVAL PVLAVLVWFS IGWSLAPLRL LSRAIRARDV NRLEPVDIGR APTEVRPLVD AINLLLSRLL HSLERERAFT ADAAHELKTP LAAIKVQAQV ALAETETARQ RLAMERVVQG VDRSARLAEQ LLLLARLDVH EKISTAPLKP ATVAKDALLA NERNAQQKDI HVTLLGDLRA EIDAEPVLIG ILLDNLLDNA IKYGHAGGSI EVAVQHAQDR VQVTVRDDGP GVEAGDLDRL TNRFFRATGN QATGSGLGLS IVARIAEHFG ASLHLGKGIG ERGLAVEVSF PAYAQAS
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