Gene Bphyt_2198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_2198 
Symbol 
ID6282423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp2480414 
End bp2481817 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content68% 
IMG OID642621756 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001895822 
Protein GI187924180 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGGCG CCTCCATTCG CCGGCGTCTC GTGCTGCTGG TGCTGACCAG CATCGCGCTG 
GTCTGGGGCG TTGCGCTGGT GTCGAGTTAT CGTCAGGCCA CCCGCGAAGT CGCCGAATGG
GAAGAGGCGC GCCTCGCGGA ACTCGCGCAG ATTCTCGCCC TGCTCGATCA GCCCAACCTG
AGCACGCTCG CCAACGCGCG CATCGACGTG CGCGAGGAAG AAAAAGGCGG CGAGCCGGGC
GCCAACGACC GCGACGACGA CGACGCGCTG CCGCGCGACG CGCTATTCCA GGTGCGCGGC
CCGAACGGCG CGGTGCTGGC GGGCAGTCCG CAACTGCACG AACTCAAGGC CTGGGATCTG
CCGGTGCCGG CGGTGAGCGG CACGCAGGAC ATCACGCTCG GCGGCCAGAT GTATCACTCG
TTCACCTTGC GCGATACCGC GCTCGGCCAC ACGGTGCGCG TCTTCGAACC GGCCAATACG
CGCAGCGATC TGGTGAGCGG CGTCGCGAGC CGCATCGCCC GTCCTACCCT GGTCGCGCTG
CCGGTGCTGG CGGTGCTGGT GTGGTTCAGC ATTGGCTGGA GTCTGGCGCC GCTCAGGCTG
CTCTCGCGCG CCATCCGTGC GCGCGATGTG AACCGGCTGG AACCGGTCGA CATCGGCCGC
GCGCCGACCG AGGTGCGCCC GCTCGTCGAT GCGATCAATC TGCTGCTGTC GCGTCTGCTG
CATTCGCTGG AGCGCGAACG CGCGTTTACC GCCGATGCCG CCCATGAACT GAAAACGCCG
CTGGCCGCGA TCAAGGTGCA GGCGCAAGTC GCGCTGGCGG AAACGGAAAC GGCGCGCCAG
CGGCTGGCGA TGGAGCGCGT GGTGCAAGGC GTCGACCGCA GCGCGCGGCT CGCGGAGCAA
TTGCTGCTGC TCGCGCGTCT GGACGTGCAT GAAAAAATTT CAACCGCGCC GCTCAAGCCG
GCAACGGTGG CCAAAGACGC GCTGCTCGCC AACGAGCGCA ATGCGCAGCA GAAAGACATT
CACGTGACGC TGCTCGGCGA CCTGCGCGCC GAGATCGACG CGGAGCCGGT GCTGATCGGC
ATCCTGCTCG ACAATCTGCT CGATAACGCG ATCAAGTACG GACACGCCGG CGGCAGCATC
GAAGTGGCGG TGCAGCACGC ACAGGACCGC GTGCAGGTGA CCGTGCGCGA CGACGGCCCC
GGTGTCGAGG CGGGCGACCT CGACCGTCTG ACGAATCGTT TTTTTCGTGC GACCGGCAAT
CAGGCCACCG GCAGCGGGCT GGGTCTGTCG ATCGTCGCGC GGATCGCGGA GCATTTCGGC
GCGAGCCTGC ATCTGGGTAA AGGCATCGGC GAGCGCGGGC TCGCGGTCGA AGTGTCGTTC
CCGGCTTACG CGCAGGCGAG TTGA
 
Protein sequence
MMGASIRRRL VLLVLTSIAL VWGVALVSSY RQATREVAEW EEARLAELAQ ILALLDQPNL 
STLANARIDV REEEKGGEPG ANDRDDDDAL PRDALFQVRG PNGAVLAGSP QLHELKAWDL
PVPAVSGTQD ITLGGQMYHS FTLRDTALGH TVRVFEPANT RSDLVSGVAS RIARPTLVAL
PVLAVLVWFS IGWSLAPLRL LSRAIRARDV NRLEPVDIGR APTEVRPLVD AINLLLSRLL
HSLERERAFT ADAAHELKTP LAAIKVQAQV ALAETETARQ RLAMERVVQG VDRSARLAEQ
LLLLARLDVH EKISTAPLKP ATVAKDALLA NERNAQQKDI HVTLLGDLRA EIDAEPVLIG
ILLDNLLDNA IKYGHAGGSI EVAVQHAQDR VQVTVRDDGP GVEAGDLDRL TNRFFRATGN
QATGSGLGLS IVARIAEHFG ASLHLGKGIG ERGLAVEVSF PAYAQAS