| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2190 |
|---|
| Symbol | |
|---|
| ID | 6283910 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 2470411 |
|---|
| End bp | 2471070 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642621748 |
|---|
| Product | two component transcriptional regulator, winged helix family |
|---|
| Protein accession | YP_001895814 |
|---|
| Protein GI | 187924172 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCTGC TACTGGTCGA AGACGACGAC ATGATCGCGG AAACGGTATT GGGCGCGATG
CGCCGCTCCG GCTACGCGAT CGACTGGGCC GAAGACGGCC GCGCGGCGGA GCTGTCGCTG
GGCAACGGCG TGTACGACCT CGTGCTGCTC GATCTTGGCT TGCCGAAGAA GGACGGCATC
AACGTCCTCA ACGCCTATCG CAAGAACGGC GGCGCCGCGC CGGTCATCAT CCTGACGGCT
CGCGACGCCG TCGACGAACG CATTCGCGGC CTCGACGCCG GCGCCGACGA CTATCTGATC
AAGCCGTTCG ACCTCGACGA ACTGGCCGCG CGCGTGCGTG CGCTGCTCAG ACGCCGCACC
GGACAGAAGC AGCCGGTCTA CGCGCACGGC GAGCTCACGC TCGACCCGGC CGCGCACGAG
GTCACCAAGT CCGGCGAAGC GCTGCCGCTG GTGCCGCGAG AATTCGCGCT GCTGCAGGCG
CTGATCGAAG AACCCACGCG CGTGTTCACC AAGGCCGAAC TCGAAGAGAA GCTGTACGGC
TGGGGCGAAG AAGTGGGCAG CAATACCATC GAAGTGCACG TGCACAGTTT GCGGCGCAAG
ATCGGCGCGG ACCAGGTGGT GACCGTGCGC GGCGTGGGTT ACCGTCTGAA GAGGTGCTGA
|
|---|
| Protein sequence | MRLLLVEDDD MIAETVLGAM RRSGYAIDWA EDGRAAELSL GNGVYDLVLL DLGLPKKDGI
NVLNAYRKNG GAAPVIILTA RDAVDERIRG LDAGADDYLI KPFDLDELAA RVRALLRRRT
GQKQPVYAHG ELTLDPAAHE VTKSGEALPL VPREFALLQA LIEEPTRVFT KAELEEKLYG
WGEEVGSNTI EVHVHSLRRK IGADQVVTVR GVGYRLKRC
|
|---|
| |