| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2187 |
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| Symbol | |
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| ID | 6283907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 2466240 |
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| End bp | 2467724 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642621745 |
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| Product | UbiD family decarboxylase |
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| Protein accession | YP_001895811 |
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| Protein GI | 187924169 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
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| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATACTC GCGATGCCGT ATCGCACGGT AATTTCCAGC TGACGTGGGG CCGCCCGTCA
GGTGTGCTCA CGCTGCGTGA CTGGCTGGCG CATCTGGCGC GCACGGACCG GGTGGCCACC
ATCGACAAAC CGGTGGAGCT CGAACACGAA CTTGCCGCGA TTGCCAAGCG CCTCGACGGC
ACGCAGGCAG CGTTCTTTAC GAAACCGGGC GGACACGACG TGCCGGTGGT CAGCGGTTTC
ATGTCGCGTC GCGCCTGGAT CGCCGAGGCG ATGGGTGTGG CCGAGGCCGA TCTGCTGACG
CGCTTTCGCG ATGCAGCCGA TCAGCCGCTT CCCTCGAAGG AAATTTCACG CGCCGAAGCC
GCCTGCCAGC AGGTCGTGCA TACCGGCGGC ATCGATCTTC ACAAGCTGCT GCCGATTCCC
ACGCACAGCG AACACGACAA CGGGCCGTAC ATTACCGCGG GTCTCGTGAT CGCGCGCAAT
CCGCGTACCG GCGTGCAGAA CGTGTCGATC AACCGCATTC AGGTGCATGG GCCCGACCGC
ATGGCGATCC TGCTGCTGCC GCGCCACTTG TACGCCTTCC AGAAAGCCGC GGAAGAGGCG
GGCGATGCGC TCGACGTCGC CATCGCGATC GGCGTCGATC CGCTGACGAT GCTCGCCTCG
CAAGCCATTT CCCCGATCGA TTCAGACGAA CTGGAAATCG CCGGCGCGCT GCATGGTGCG
CCGCTGCCGG TGGTCAAGTG CGTGAGCAAC GGCGTGAATG TACCAGCCTT CGCCGAGATC
GTGATCGAAG GGCGCATTCT GCCCAACGTG CGCGAACTGG AAGGCCCGTT CGGCGAATTC
CCCAAGTACT ACAGCGCGCA AGAAGCGCGT GAAGTGATCG AAGTCACCGC GGTGACGCAT
CGCGAGAAGC CGATTTTTCA TACGATCGTG CCGGCGGAAA TGGAGCACCT GCTGCTTGGC
GCGATTCCAC GTGAGGCGAC TCTGCTCGCG CATCTGCAAC GTAGTCATCC TAACGTCAAG
GACGTGCATC TTTCCGTAGG CGGCGTGTGC CGCTATCACT TGTGGGTGCA GTTCGAGAAG
AAGCGCGAAG GCGAAGCGAA GAACGTGATT CTGTGCGCGT TCGGCGCGCA CTACGATATC
AAGCAGGTGG TCGTGGTCGA CACCGACGTC GATGTGCACG ATCCGGCCGA AATCGAATGG
GCCATCGCCA CGCGTTTCCA GGCCGATCGC GATCTGGTCG TGATCGAAGG CGCGCAAGGC
TCGCCGCTCG ATCCGTCCAC CACCGTCGGT CAGCCGGAAG ACGCGCCGCC GCATCTGCAA
GGCGTGAGCG CGAAGATGGG ACTCGACGCC ACGCGGCCTG TGGTGTATCC GTCGCACGTG
TTCACGCGGG TGCGCATTCC GGGCCAGGAC ATGGTGAATC TCGACGAACT CGTCGCCGCC
GACAACACCG CGTTCGATAC CTATCTGGGT GGCGCGCATG GCTGA
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| Protein sequence | MNTRDAVSHG NFQLTWGRPS GVLTLRDWLA HLARTDRVAT IDKPVELEHE LAAIAKRLDG
TQAAFFTKPG GHDVPVVSGF MSRRAWIAEA MGVAEADLLT RFRDAADQPL PSKEISRAEA
ACQQVVHTGG IDLHKLLPIP THSEHDNGPY ITAGLVIARN PRTGVQNVSI NRIQVHGPDR
MAILLLPRHL YAFQKAAEEA GDALDVAIAI GVDPLTMLAS QAISPIDSDE LEIAGALHGA
PLPVVKCVSN GVNVPAFAEI VIEGRILPNV RELEGPFGEF PKYYSAQEAR EVIEVTAVTH
REKPIFHTIV PAEMEHLLLG AIPREATLLA HLQRSHPNVK DVHLSVGGVC RYHLWVQFEK
KREGEAKNVI LCAFGAHYDI KQVVVVDTDV DVHDPAEIEW AIATRFQADR DLVVIEGAQG
SPLDPSTTVG QPEDAPPHLQ GVSAKMGLDA TRPVVYPSHV FTRVRIPGQD MVNLDELVAA
DNTAFDTYLG GAHG
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