| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2165 |
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| Symbol | |
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| ID | 6281750 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 2442356 |
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| End bp | 2443099 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642621724 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001895790 |
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| Protein GI | 187924148 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCAGA GAGTCGTTCT TGTCACCGGC GCCGCGCGCG GTTTGGGCGC CGCGATCGCC
ACGCGCTTTC ATGCGGCGGG TTACGCAGTC GCCATCGGCG ATATCGCGTT CGACGCCGCA
GATGCGCTCG CGCGCGATCT GAGCGCCGAC GGTTCCACTG CGTTCGCGCT GAATCTCGAC
GTCACCGCGA AAGCCGCCTT CACGGCCGCG CGCGACGCGA TACTGCAGCG TTGGGGGCGT
ATCGACGCGT TGGTGAATAA CGCGGGCGCC TCCAAAGTCG TCTCCGTGAT GGACATTACC
GCCGAGCAAT TCGATCAGGT CATCAACGTC AACTTGCGCA GCGTGCTGTT CGGCTGCCAG
GTGTTCGGCC AGCATTTCGC CGACGTGGGC GCGGGCCGTA TCGTCAATAT CGCGTCGCTC
GCGGGACAGA ACGGCGGCTC CGCAACCGGC GCGCATTATG CGGCTGCGAA AGGCGGTGTG
ATCACGCTCA CCAAGGTCTT CGCGCGCGAT CTCGCCGCGG CGGGCGTGAC TGTCAACGCC
ATTTCGCCCG GACCGATGGA TCTGCCGATC GTGCATGAAA GCGTCGCGCC CGACAAACTG
AAGGCGGTGA TCGCGAACAT TCCCGCAGGA CGTCTGGGCT CGGCGGAGTA TGTCGCCGAT
GTCGCGGTCA TGCTCGCTGC GGAAAATGCC TACTTTGCGA ACGGCGCGTG CTGGGACGTG
AACGGCGGAC TCTTCATGCG CTGA
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| Protein sequence | MQQRVVLVTG AARGLGAAIA TRFHAAGYAV AIGDIAFDAA DALARDLSAD GSTAFALNLD
VTAKAAFTAA RDAILQRWGR IDALVNNAGA SKVVSVMDIT AEQFDQVINV NLRSVLFGCQ
VFGQHFADVG AGRIVNIASL AGQNGGSATG AHYAAAKGGV ITLTKVFARD LAAAGVTVNA
ISPGPMDLPI VHESVAPDKL KAVIANIPAG RLGSAEYVAD VAVMLAAENA YFANGACWDV
NGGLFMR
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