| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2155 |
|---|
| Symbol | |
|---|
| ID | 6281959 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 2432668 |
|---|
| End bp | 2433618 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642621714 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_001895780 |
|---|
| Protein GI | 187924138 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 54 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATATA AAATCAACCG TATGGATATC TCGATGAACT CGCTGGACCA CGTCGACCTC
AATTTGCTGC GCGTTTTTCA GGCGATCGTC GAGGAGCGCA GCCTGACTCG CGCGGGCGAG
CGGCTGGCGC TCTCGCAGCC GGCCATCAGC TATTCGCTGG GGCGTTTGCG CACGCTGTTT
GACGACCCGC TTTTCATTCG CACGCGCGCC GGCATGCAGC CCACGCCGAT CGCGCTGGAA
CTGTCGACTA TCGTGTCCCG CGCGCTCGAC ACGGTGCGAG AAGCGCTGCG TTACGCGGAG
CATTTCGACC CGGCGGTGAG CACGCGCACG TTCCGGCTGT CGTTATCGGA CGCGGGCGAG
CTGGCCTACC TGCCGCCGAT TTGCGAGGCT TTGCACCGGC AAGCGCCGCG CGTGAGGCTG
CGTATCGAAC CGCTGCCAGT CGAAGAAATG GAAGATGCAC TACGCGCGAG CCGGCTCGAT
TTCGCCATCG GCAATCTGCC CACGCTGACC GCGCGCACGC GCCATCAGGC GCTGTTCGAA
GAGACGTACG TGTGTATGAC GAGGAAGCGG CGCGGCTTGC CGCGCACGAA GGAGCTGAGT
TTGAAGGCGT TTCTGGATGC GTCGCACGTG CAGATCACAT CGGTCGAGCA CAGCCACCAC
GCGCTCGACG ACGAATTTCG CGCGCAAGGC GTCGGCCGTC ATATCGCGCT GGAACTACCG
CATTTCGTGG CGCTGCCGAG TGTGCTGGCC GTCACCGATC TGTTCGCTAC GCTGCCGCGG
CGTCTTGCGC ACATTTTCAA TCGCGACGGC GGCTTCCAGA TCTATGAATT GCCCGTGACC
TTGCCGATCG CGGCGGTCAC GATGCATTGG CACGAGCATT TCGATCAGGA CGAGGGCAAT
GTGTGGCTAC GCAATCTGAT GGCGGATATC GTGAGGCGCT TCGACGAGTG A
|
|---|
| Protein sequence | MKYKINRMDI SMNSLDHVDL NLLRVFQAIV EERSLTRAGE RLALSQPAIS YSLGRLRTLF
DDPLFIRTRA GMQPTPIALE LSTIVSRALD TVREALRYAE HFDPAVSTRT FRLSLSDAGE
LAYLPPICEA LHRQAPRVRL RIEPLPVEEM EDALRASRLD FAIGNLPTLT ARTRHQALFE
ETYVCMTRKR RGLPRTKELS LKAFLDASHV QITSVEHSHH ALDDEFRAQG VGRHIALELP
HFVALPSVLA VTDLFATLPR RLAHIFNRDG GFQIYELPVT LPIAAVTMHW HEHFDQDEGN
VWLRNLMADI VRRFDE
|
|---|
| |