Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_2140 |
Symbol | |
ID | 6282739 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 2418493 |
End bp | 2419389 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642621699 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_001895765 |
Protein GI | 187924123 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAATC TATTTCAGGC CATGCAGGCG TTCGTCAAGG TCGCCGACGC GGGCAGCTTC GCGCAGGCCG CGGAGCAACT CGGCGTCTCG ACCTCGGTGG TCACGCGCCA CGTGTCGAGC CTTGAAAAGC ATCTCGGCAT CCGCCTGTTC CAGCGGACCA CGCGCAAGGT CGTGCTGACC GAAGCCGGCG CCGAATATGG CGACGGCTGC CGCCTGCTGA TGGCCGAACT CGAAGAAGTC GAATCGCGCG CCACCACGGC TTCGAAGGAA GTCGCGGGCG ATCTGCGCAT CGTGGCGCTG GGCAGCTTTT CGCTGTTTCG CCTCACGCCG CTGTTCGCGG AGTATCAGGC CAAGTTTCCG CGTGTGAATC TGCGGGTTAC GTTAACGGAG AAACGCGTGG ATCTACTCGA AGGCGGTTTC GATGTGGGGA TCGTGACCGA GCATATGATC CGCTCGGAGT CGCTGGTGGT GCGCCGGCTG ATCAACTCGC ACGCGGTGCC GGTGGCGTCG GCTGCTTACC TTGCGCAGGC CGGCCATCCG AAAACGCCCG CCGACCTCGC GCGGCATCGC GTGATCACCG CGCCACTCGA CACCAGTCCG CAGACCTGGG TGTTCGACAA CGGCGACGGC GGCGAAGACA GCATCGCGCT CGATGCGTCG TTCACCGTCA ACAGCATGAT CATGCAGAAA CAGGCGGCGC TCGGCGCGAT GGGCATTGCG CTGCTGCCGC TGGAGATGGT CGATGACGAA TTGCGCGCGG GCACGCTGAT GCGGATTCTC GAGGATCATG CCGTGCTCAA CGGCGACGTG GCGGTGTCGC TCGTGTATCC GAGCCGGGAG TTCGTGCCGC GCAAGATCCG CGAGTTTATC GATCTGGCGG TGGGGTTTTT CGAGTGA
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Protein sequence | MINLFQAMQA FVKVADAGSF AQAAEQLGVS TSVVTRHVSS LEKHLGIRLF QRTTRKVVLT EAGAEYGDGC RLLMAELEEV ESRATTASKE VAGDLRIVAL GSFSLFRLTP LFAEYQAKFP RVNLRVTLTE KRVDLLEGGF DVGIVTEHMI RSESLVVRRL INSHAVPVAS AAYLAQAGHP KTPADLARHR VITAPLDTSP QTWVFDNGDG GEDSIALDAS FTVNSMIMQK QAALGAMGIA LLPLEMVDDE LRAGTLMRIL EDHAVLNGDV AVSLVYPSRE FVPRKIREFI DLAVGFFE
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