| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2126 |
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| Symbol | |
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| ID | 6282961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 2399906 |
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| End bp | 2400982 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642621685 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001895751 |
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| Protein GI | 187924109 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATCCG CTACCCGATT TTCTCCCAGA ACGATCCGTC TGGCCGCCTA TGCGGTCATA
CTCGGCGTCG CTGTGCTGGC CTGCATCTGG CTGTTTGCCG GCTCGACCAG CGAAACCACG
AACGATGCCT ATGTGACGGC CGATTTCACG CTGGTCGCGC CGCGTGTCGC GGGTCAGGTG
TCCGAGGTGC TCGTTGAAGA CAACCAGCAG GTCAAGGCGG GGCAATTACT GGTACGCATC
GATGACCGCG ACTTTCGTGC CGCGTTGATG AGTGCCGGGG CCGACGTGGC GGCAGCCAGG
GCATCGGTTG CAAACTACGA GGCCGAGATC GCACGGCAGC CCGCGCTCGT CGATCAGGCG
CGTGCCACGC TGCGCGCCGA CGATGCGACG CTCGAGTTTG CGCGTGCGAA TGCCGCGCGC
TACCGCAATC TTTCGGAGAC CGGTGCGGGA ACCACCCAGG AGCAGCAGCA CGCGGCGAGC
GCGCTGGCCG AGGAACTCGC GCAGCAGGCG CGCAACCGCG CCGCACTGGT GGCGACCGTG
CAGAACCTCG ACGTGCTGAA GACACAGCGC GACAAGGCGG CGGGTGCCTT GGCCCGCGCC
GAAGCCATGC TCGAGCAGGC GAAACTCAAC CTGTCGTATA CGGAGATCCA CGCGCCCATC
GACGGCAAGG TCGGACGGCG TTCGGCACGT GTGGGCGCAT TCGTGACGAC CGGCGCGCCG
CTGCTCGCGA TCGTCCCGCT GTCGGAGGCC TATATCGTCG CCAATTTCCA GGAGAACCAG
CTTGCAAGGA TGCGCCCCGG CGACACCGTG CGTATCAAGG TCGACAGTTT TCCGGGCGTG
GTGATCCGCG GGCATGTCGA TAGTCTTGCG CCTGCTACAG GCGTGAGCTT CGCGCCTATC
GCACCCGATA ACGCAACGGG CAACTTCACC AAGATCGTGC AGCGCGTGCC GGTCAGAATC
ACCATCGATC ATGGACAACA GGCGGCGGCC GCATTGAGTG TGGGCCTTTC CGTCGAAACG
GAGGTCGCCG TCGGCAGGCG CGCCGATATG CGGGTCGCGG GAGCGGATTC GAAATGA
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| Protein sequence | MSSATRFSPR TIRLAAYAVI LGVAVLACIW LFAGSTSETT NDAYVTADFT LVAPRVAGQV
SEVLVEDNQQ VKAGQLLVRI DDRDFRAALM SAGADVAAAR ASVANYEAEI ARQPALVDQA
RATLRADDAT LEFARANAAR YRNLSETGAG TTQEQQHAAS ALAEELAQQA RNRAALVATV
QNLDVLKTQR DKAAGALARA EAMLEQAKLN LSYTEIHAPI DGKVGRRSAR VGAFVTTGAP
LLAIVPLSEA YIVANFQENQ LARMRPGDTV RIKVDSFPGV VIRGHVDSLA PATGVSFAPI
APDNATGNFT KIVQRVPVRI TIDHGQQAAA ALSVGLSVET EVAVGRRADM RVAGADSK
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