| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2120 |
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| Symbol | sucA |
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| ID | 6282955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 2390768 |
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| End bp | 2393617 |
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| Gene Length | 2850 bp |
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| Protein Length | 949 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642621679 |
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| Product | 2-oxoglutarate dehydrogenase E1 component |
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| Protein accession | YP_001895745 |
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| Protein GI | 187924103 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
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| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGGACA GATTCATCAT GTTGATGGAA AAAATTCAAA GCTCTTTTCT GTTCGGGGGC
AACGCGCCCT ACGTCGAGGA GCAATACGAA CTCTACCTGG CCGACCCGGC ATCGGTCGCG
GATGAGTGGC GCGCGTTTTT CGATGCGTTG CGCGAAACCC CCGCTATCGA CGGCAGCGAC
CGCGATGACG AGCCGCACGC GCCGGTCGTT TCCACCTTCG TCGATCTGGC CAGGCGCTCG
CGCGCCACGC AGATCACGCT CGACGACGGC CTCGCGATCG CCAGAAAACA GGTGGCCGTG
CAGTCGCTGA TTGCCGCGTA TCGCATGATC GGCACGCGCA AGGCGAAACT GGACCCACTG
CTGTGGACGC CGCCGAAGGC TTCGATCGAA CTCACGCCAG CGTTCTATGG CCTATCGTCA
GCCGACATGT CTACGCGATT CAGCACCGCC GACACGTTTC TTTTCGACGA AGACGCCACG
CTGCAGGACC TCGTCGCGGC ACTCGAGCAG ACTTACACGG GCACCCTCGG CGCCGAGTTC
ATGCATCTGA CCGATGCTGG CGAACGACGC TGGTGGCAGA TGCAACTCGA GTCGACCCGC
GCGAAACCTT CGTTCTCGGT AGCGGAGAAA CACCGCTTTC TCGAACGTCT AACGGCTGCT
GAAGGACTGG AGAAGTACCT GCACACGCGC TATGTCGGGC AAAAGCGTTT CTCGTTGGAA
GGCGGCGAAT CGTTGATCGT GTTGCTGGAT GAACTCGTTC GCTATGGCGC ATCGAAGAAG
GTCGCCACGG TGGTAATGGG CATGGCGCAC CGTGGGCGTT TGAATGTGCT GGTGAATATT
GTCGGCAAGC CGTTGCGCGC ACTCTTCGAC GAGTTCGAGG GCAAGAGCGG CGACTCTCTG
CCGGCCGGCG ACGTCAAATA TCACAAGGGC TACAGCAGCG TCACGCAGAC GGACGACGGG
CCCGTCGATG TCGTGCTCGC ATTCAATCCC TCGCACCTGG AAATCGTCAA CCCGGTCGTG
CAGGGCATGG CTCGCGCCAA AGGAGACGCC TCGAACGAGC GCGACGGTAG CGACGTGCTG
CCCGTCGAAA TTCACGGCGA CGCGGCAATG TCCGGGCAAG GCGTCGTAAT GGAGACGTTG
AGCCTGTCGT ACACGCGCGG ACACGGCACG GGCGGAACCG TCCACGTGGT CGTGAACAAC
CAGATCGGCT TTACGACTTC GGATCCGCGC GATACGCGCT CGTCGTTCTA CACCACCGAC
ATCGCGAAGA TGATCGAGGC GCCGGTTCTG CATGTCAACG CCGACGACCC GGAAGCAGTG
GCCATGGCGG TGCGCCTCGC GCTCGACTAT CGCACGACGT TCAGGCGCAG CGTGGTGATC
GATCTTGTCT GTTTCCGCAG GCATGGGCAT CAGGAACAGG ACACGCCCGC CATCACGCAG
CCTCTCATGT ACCGCGCGAT TGCCAGCCAC CCGGGCGTGA GGACCGTGTA CGCCCAACAG
TTGATCAAGG AAGGCGTGGT GACGCCGGAT CAGGTCAAGG ATTACCTCGA AGCGCAGCGC
GAAAGCTTCG AGCACGCGAG AGAGAGCAAC GCTGTCGAGG CAGCGGACCA GACGGACGAA
ATACCCGGAT GGCCGAAGTT TCTCGAGGAC TATGCCGGCC CGGTTCAGTA TGGGCCTCCG
TTGTCCGCTC AGGTGCGTGC GCTGGCGCAG CAGGTCTCGA CCGTTCCGGA TGGTTATGAA
CTGCATCCGC TGGTCGGCAA GATGATCGCC GCACGCCGCG AGATGGCCGC GGGAAACAAG
CGGCTCGATT GGGGCATGGG CGAGCACATG GCATTCGCCT CGTTGCTGAG CGCCGGGATC
GATGTCCGCC TGAGCGGGCA GGATAGCGCG CGGGGCACCT TCAATCACCG TCACGCCGTT
CTGCACAACC AGACGCGCAC GAGCCGCTCG GAGGGCGTCT ACATTCCGCT GGAGCATATC
GGCGAGGGGC AAGGCCGGTT TACCGTGACG AACTCCATTC TGTCGGAGGC CGCCGTGCTG
GCCTTCGAGT ATGGCTACTC GACGGTGAAC CGCAATGCGC TCGTCGTGTG GGAAGCGCAG
TTCGGGGACT TCGCGAATGG TGCGCAGGTC GTGATCGATC AGTTCATCGC GGCGGGCGCC
GCAAAGTGGG GGCAACTCAG CGGGTTGACG CTGTTCCTGC CGCACGGACA GGACGGGCAG
GGACCGGAAC ACGCGTCGGC GAGGCTCGAG CGATATCTGC AACTTAGCGC GCAGGACAAC
ATGCGGGTAG TCCAACCGAC CACGCCCGCG CAACTGTTCC ACTTGCTGAG GATGCAAGCG
GCTGTCTTCG ATCGCCGGCC GCTCGTCGTG ATGACGCCCA AGTCGCTGTT GCGTCATCCG
GAAGCCGTCA GCACGCTCGA CGATCTGGCC ACGGGTGCGT TCCGCGAGAT TCTGGTGGAT
ACGCAAGCCG AGCCGTCGCC TGCGTCGAGC GTGGAGCGCG TGATCGTGTC TTCTGGCAAG
GTCTATTTCG ATCTGCTGGA ACATCGCCGC ACGTCGGGTG TTGCCGATAC GCCGCTCATC
CGCGTCGAAC AGTTGTATCC GTTTCCGTCC CGGCAGCTCG CCGCGGAGTT CGCGCGCTAT
CCGAATCTGA AGACGGTGGT CTGGTGTCAG GAGGAGTCGC GCAACCAGGG CGCGTGGAGC
TTCGTGGAAC CGCAGTTGCG TGAGATCCTG CCTTCGGATG CGCAACTGCG GTATGCGGGG
CCGGCGGCTT CCGCGTCGAC CGCGCCTGGT TATCACGCGG TCCACGCGGC GAGGCAGGCA
GCGCTGATTT CGAGTGCATT CACGGACTGA
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| Protein sequence | MEDRFIMLME KIQSSFLFGG NAPYVEEQYE LYLADPASVA DEWRAFFDAL RETPAIDGSD
RDDEPHAPVV STFVDLARRS RATQITLDDG LAIARKQVAV QSLIAAYRMI GTRKAKLDPL
LWTPPKASIE LTPAFYGLSS ADMSTRFSTA DTFLFDEDAT LQDLVAALEQ TYTGTLGAEF
MHLTDAGERR WWQMQLESTR AKPSFSVAEK HRFLERLTAA EGLEKYLHTR YVGQKRFSLE
GGESLIVLLD ELVRYGASKK VATVVMGMAH RGRLNVLVNI VGKPLRALFD EFEGKSGDSL
PAGDVKYHKG YSSVTQTDDG PVDVVLAFNP SHLEIVNPVV QGMARAKGDA SNERDGSDVL
PVEIHGDAAM SGQGVVMETL SLSYTRGHGT GGTVHVVVNN QIGFTTSDPR DTRSSFYTTD
IAKMIEAPVL HVNADDPEAV AMAVRLALDY RTTFRRSVVI DLVCFRRHGH QEQDTPAITQ
PLMYRAIASH PGVRTVYAQQ LIKEGVVTPD QVKDYLEAQR ESFEHARESN AVEAADQTDE
IPGWPKFLED YAGPVQYGPP LSAQVRALAQ QVSTVPDGYE LHPLVGKMIA ARREMAAGNK
RLDWGMGEHM AFASLLSAGI DVRLSGQDSA RGTFNHRHAV LHNQTRTSRS EGVYIPLEHI
GEGQGRFTVT NSILSEAAVL AFEYGYSTVN RNALVVWEAQ FGDFANGAQV VIDQFIAAGA
AKWGQLSGLT LFLPHGQDGQ GPEHASARLE RYLQLSAQDN MRVVQPTTPA QLFHLLRMQA
AVFDRRPLVV MTPKSLLRHP EAVSTLDDLA TGAFREILVD TQAEPSPASS VERVIVSSGK
VYFDLLEHRR TSGVADTPLI RVEQLYPFPS RQLAAEFARY PNLKTVVWCQ EESRNQGAWS
FVEPQLREIL PSDAQLRYAG PAASASTAPG YHAVHAARQA ALISSAFTD
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