Gene Bphyt_2108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_2108 
Symbol 
ID6283887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp2374669 
End bp2375439 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content64% 
IMG OID642621667 
Producthypothetical protein 
Protein accessionYP_001895733 
Protein GI187924091 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.327419 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAACG CAGACACCAT CATGAAAGCT ACCCCGGTTG TTGAAGACGC CATCTTTCAC 
GCCCCGCAAG TCGCCGCCTT ACGGCGAGAC CTTGCGCTGG CACTGCGCGC GGCCGCGCAT
CACGGCCTCG GCGAAGGCGT ATGCAACCAT TTCAGCATCG CACTGCCCGG CGACCAGGGC
CTCTTTCTGC TGAATCCGCG CGGCTTGATG TGGCATGAAA TCCAGGCGGA CGACATCCTC
ATCGTGGATG GTCTCGGCAA TCGCGTCGCC GGCCGGCACG AGGTCGAGCC TACCGCCATG
TTCATTCACG CGGCGGTCCA TGACATCGCG GGCAAGCATT GCGTGCTGCA TACGCATATG
CCCTATGCCA CGGCGTTGAC GCTGACGGAG GACTGCGGAC TCGACACCAC GTTGTCGCAA
AACGCCATGC GCTTTCACGG CCGGGTCGCC CTCGACCGCG AATACAACGG CCTCGCGCTA
GACGCCGCGG AAGGCGAGCG CATCGCGCGC GCGATGAGCG GCAGCGACAT CGCGTTCCTC
GGCAACCACG GCGTGGTGGT GTGCGGCGAG CGCATCGACT ACGCGTTCGA TGATCTTTAC
TATCTGGAGC GCGCTTGCCA AAGCCAGGTG CTGGCGCTTT CCACGGGGCG CGCGCTGAAG
CCGGTGAACC CTGCCCTCGC GGCTCGCGTG GCACATCAGG TGCAAAGCGA GCGAACGCAG
TCGGAACTGT TCTTCGCGGC GTTGAGGCGC ACGCTGGGCG AACCGGTATA G
 
Protein sequence
MTNADTIMKA TPVVEDAIFH APQVAALRRD LALALRAAAH HGLGEGVCNH FSIALPGDQG 
LFLLNPRGLM WHEIQADDIL IVDGLGNRVA GRHEVEPTAM FIHAAVHDIA GKHCVLHTHM
PYATALTLTE DCGLDTTLSQ NAMRFHGRVA LDREYNGLAL DAAEGERIAR AMSGSDIAFL
GNHGVVVCGE RIDYAFDDLY YLERACQSQV LALSTGRALK PVNPALAARV AHQVQSERTQ
SELFFAALRR TLGEPV