| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2107 |
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| Symbol | |
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| ID | 6283886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 2373085 |
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| End bp | 2374419 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642621666 |
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| Product | transcriptional regulator, GntR family with aminotransferase domain |
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| Protein accession | YP_001895732 |
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| Protein GI | 187924090 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.957834 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCACGC CCCGCTACAA ATTGCTGGTC GACAGAATGG CGATGGACAT TCGCAGCGGA
CGCCTCGCGC CCGGCACGCG TCTGCCGACT CACCGTCAGC TCGCCTCGCA GGAGGGACTC
GCGCTCGTCA CCGCGTCGCG GGTCTATGCC GAGCTAGACG CAATGGGATT GGTCAGCGGC
GAAACCGGCC GCGGCACTTT TGTGCGGGAA ATTGCGTTGC CGGCGCGCCT AGGCATCGAC
CAGCACGCCG GCGACGCGGG CCTGGCGGAC CTCAATTTCA ACAATCCGTC GCTTCCCGGC
CAAGCCGAAC TGCTCAGAAG CGCCTTGCGT CAACTCGCGT CCTCCGGCGA TCTGGACGCG
TTACTGCGCT ATCAGCCCCA TGGAGGCCGC ACGCATGAAC GCGAGATCGT CGCGCGCCAC
CTGTCGTCTC GAGGACTAGC CGTCGAAGGC GCTCAGGTCG TGATCGTGAA CGGCGCGCAG
CATGGTTTGA CCGCAACCGT TCTGGCGCTC CTGAAGCCCG GCGACGTCGT CGCGGTCGAC
GCATTGACCT ACCCGGGGTT CAAGGTGCTG GCCGAAACGA TCCGGCTTGA ACTGGCGCCG
ATTCCGGTTT CCGACCAAGG CCCCGACCTC AAGGCGCTCG AACGCTTGTG CCGAACCAGA
AAAGTGCGCG CCATCTACAC GATGCCGACA CTCCATAACC CGCTAGGTTG CGTCATGAAC
GCGCAGGGCC GGCACGAGTT GGTGTCGATT GCCCGCAAGC ACGGGCTGCT CATCATCGAG
GACGCCGCGT ATGCCTTCCT CGCGGAAAAT CCGCCGCCCC CGTTGGCCGC GCTCGCGCCT
GAAACGACGG TGTACGTCTC GGGCCTGTCG AAAAGCATCG CCACCGGCCT GCGAGTCGGC
TTCGTCGCCG CGCCCGATCG CTGGGTCGCA CCGCTCGAAC GTGCGATCCG GGCCACCACC
TGGAACACGG CTGCGGTGAT GACCGCGATT GCCTGCGGCT GGCTCGACGA CGGCACCGTC
ACGCGCCTGG AGAGGGAGAA GCGTCGCGAT GCGGCGCTCC GGCAATCGAT GGCCGCCGAG
GTTCTCGCCG GACTGCGGCG CGTTTGCCAT CCCGCGTCCT ACTTCGTCTG GCTTCCGCTC
GCGGAAGAGG TTCGCGCCGA CGTGGTGGCG ATGGCGCTCG TGCGCGAGGG AATCTCTGTC
TCCACGGCCG AACCTTTCTC GACTTCGGAG CATGTACCCC ACGCGATTCG CGTGGCGCTG
GGGTCCGTCG ATCTGCCCGT ACTCCGGGAG TCGCTGCAAA CGGTTAAAGG CGTGATCGCC
TCTTACACCT ATTGA
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| Protein sequence | MPTPRYKLLV DRMAMDIRSG RLAPGTRLPT HRQLASQEGL ALVTASRVYA ELDAMGLVSG
ETGRGTFVRE IALPARLGID QHAGDAGLAD LNFNNPSLPG QAELLRSALR QLASSGDLDA
LLRYQPHGGR THEREIVARH LSSRGLAVEG AQVVIVNGAQ HGLTATVLAL LKPGDVVAVD
ALTYPGFKVL AETIRLELAP IPVSDQGPDL KALERLCRTR KVRAIYTMPT LHNPLGCVMN
AQGRHELVSI ARKHGLLIIE DAAYAFLAEN PPPPLAALAP ETTVYVSGLS KSIATGLRVG
FVAAPDRWVA PLERAIRATT WNTAAVMTAI ACGWLDDGTV TRLEREKRRD AALRQSMAAE
VLAGLRRVCH PASYFVWLPL AEEVRADVVA MALVREGISV STAEPFSTSE HVPHAIRVAL
GSVDLPVLRE SLQTVKGVIA SYTY
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