| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2087 |
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| Symbol | |
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| ID | 6282698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 2352791 |
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| End bp | 2354248 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642621648 |
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| Product | permease for cytosine/purines uracil thiamine allantoin |
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| Protein accession | YP_001895714 |
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| Protein GI | 187924072 |
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| COG category | [F] Nucleotide transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG1953] Cytosine/uracil/thiamine/allantoin permeases |
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| TIGRFAM ID | [TIGR00800] NCS1 nucleoside transporter family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.611219 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAATCC GCGACCCTTC GCCCGGCCTT TACAACGAAG ATCTCGCCCC TTCGAGGGTG
CGCAACTGGG GGGCCTTCAG CATCTTCAAC GTCTGGACCT CCGATGTGCA CAGTCTCTGG
GGCTACTACC TCGCCGCCAG CCTGTTCCTG CTGTGCGGCA CGTTCACCAA CTTCGTGCTG
GCGATCGGAA TCGGCTCGCT GGTGATCTTC GCGCTGATGA ACCTGATCGG CTACGCCGGC
GAGAAGACCG GCGTGCCTTA TCCGGTACTG GCGCGCGCGT CCTTCGGCGT GTGGGGCGCC
AATCTTGCGG CGCTGGTGCG CGCCGTGGTG GCCTGCTTCT GGTACGGCGC GCAGACGGCC
GCGGCCGCGG GCGCGCTGGT CGCGCTGCTC ATCCGCAACG ACAGCCTGAT GACGTTCTAC
AAGGGCACGC ACTTCCTCGG CCACTCGGGA CTGGAGGTGA TCTGTTACGT GGTCATCTGG
GCGCTGCAGT TGCTCATCAT CCAGAAGGGC ATGGAGACGG TGCGCAAGTT TCAGGACTGG
GCCGGCCCGG CAGTGTGGGT CGCGATGCTG ATTCTGGCGA TCGGGCTGTG CGTGAAGGCC
GGCGGCTTCT CTTTCTCGCA CGGCATTCCG ATGGACGTGC TGCTCGACAA AACCAAAGAT
GCCGGTGTCA GCGGTGAGCC GGGCTCGTTC TGGGCGCTGA TGGCAGTGGG CGCGACCTGG
ATCACTTACT TCGCGGCGCT GTACCTGAAT TTCTGCGACT TCTCGCGCTA CGCCAGGAAT
CGCGATGCCG TGAAGAAAGG CAATCTGTGG GGTCTGCCGG TCAATCTGAT CGCGTTCTCG
CTGGTGGCCG GCATCACCAC CATCGCCGCC TTCAAGGTGT ACGGCGAGGT GCTGCTGCAC
CCCGAGCAGA TCTCCGCCAA GTTCGACAGC TGGGTACTGG CGCTCATCGC GGCGCTGACC
TTCGCGGTCG CCACGCTGGG CATCAACGTG GTCGCCAATT TCGTCTCGGC CGCGTTCGAC
ATCTCCAACG TGTTCCCCAG GCAGATCAGC TTCAAGAAGG GCGGCTATAT TGCCGCGGCC
ATCGCGCTGG TGCTCTACCC GTTCGCGCCG TGGGAAGGCA ACGCCGCGCA CTTCGTCAAC
GCCATCGGCG CGACGATGGG CCCTTTGCTG GGGATCATTC TGGTGGACTA CTATCTGGTC
GCCAAGGGCA ACATCAACGT TGCAGCGCTC TATCAGGAGT ATGGCGAGTA CCGTTACGAA
GGCGGCTGGA ACGTCAACGC GTTGATCGCG GCAGCGATCG GCAGCGTGTT TTCGACCTTT
CTGCCGAACT TCACCACGCT GCTGCCGGTC TGGTGGAATA CCTATGGCTG GTTCTTCGGC
GTGCTGATCG GCGGCGGCAC GTATCTGATC ATGGCGACGC TGCGGCCACG CGCGGCCGTC
GCGCCGACCC GCGCTTAA
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| Protein sequence | MEIRDPSPGL YNEDLAPSRV RNWGAFSIFN VWTSDVHSLW GYYLAASLFL LCGTFTNFVL
AIGIGSLVIF ALMNLIGYAG EKTGVPYPVL ARASFGVWGA NLAALVRAVV ACFWYGAQTA
AAAGALVALL IRNDSLMTFY KGTHFLGHSG LEVICYVVIW ALQLLIIQKG METVRKFQDW
AGPAVWVAML ILAIGLCVKA GGFSFSHGIP MDVLLDKTKD AGVSGEPGSF WALMAVGATW
ITYFAALYLN FCDFSRYARN RDAVKKGNLW GLPVNLIAFS LVAGITTIAA FKVYGEVLLH
PEQISAKFDS WVLALIAALT FAVATLGINV VANFVSAAFD ISNVFPRQIS FKKGGYIAAA
IALVLYPFAP WEGNAAHFVN AIGATMGPLL GIILVDYYLV AKGNINVAAL YQEYGEYRYE
GGWNVNALIA AAIGSVFSTF LPNFTTLLPV WWNTYGWFFG VLIGGGTYLI MATLRPRAAV
APTRA
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