Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_2078 |
Symbol | |
ID | 6281379 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 2344372 |
End bp | 2346633 |
Gene Length | 2262 bp |
Protein Length | 753 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642621639 |
Product | catalase/peroxidase HPI |
Protein accession | YP_001895705 |
Protein GI | 187924063 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0376] Catalase (peroxidase I) |
TIGRFAM ID | [TIGR00198] catalase/peroxidase HPI |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.582232 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAAGCG AAGCAAAGTG CCCGTTCAAC CATGCCGCTG GCGGCGGCAC GACGAACCGC GACTGGTGGC CCAAGCAACT GCGGCTGGAT CTGCTGAGCC AGCACTCCAG CAAGTCGGAC CCGCTGGACG GCAGCTTCAA CTACGCCGAG GCTTTCAAAA CCCTCGATCT GGCCGCGGTG AAAAAAGACC TCGCCGCGCT GATGACCGAT TCGCAGGACT GGTGGCCAGC CGACTTCGGC CACTACGGTC CGCTCTTCAT CCGCATGGCC TGGCACAGCG CCGGCACGTA CCGTATCGGC GACGGCCGCG GCGGCGCAGG GCGCGGTCAG CAGCGTTTCG CGCCGCTCAA CAGCTGGCCG GATAACGTCA GCCTCGATAA GGCGCGCCGC CTGCTCTGGC CGATCAAGCA GAAGTATGGC CAGAAGATTT CCTGGGCCGA TCTGCTGATC CTGACCGGCA ACGTCGCGCT CGAAACCATG GGCTTCAAGA CCTTCGGCTT CGCCGGCGGC CGCCCCGACA CATGGGAGCC GGATCAGGAC GTCTACTGGG GCAACGAAAA GACCTGGCTG GGCGGCGACG TCCGCTATGG CAAGGGCGCC GCGGGCAATG AAGAGGACGG CGGCGTGATC GTCGCCGACG TGGAAAAGCA CGGCGAAGAG GTCAGCCGCG ACGACAACGG ACGCATCCTG GAAAATCCGC TGGGCGCCGT GCAGATGGGC CTGATCTACG TCAACCCGGA AGGTCCGGAC GGCAATCCGG ACCCGCTTGC CGCCGCGCAT GACATCCGCG AAACCTTCGC TCGCATGGCC ATGAACGACG AGGAAACCGT CGCGCTGATC GCCGGCGGGC ACACTTTCGG CAAGACGCAC GGAGCCGGTC CGGCCGATAA CGTCGGTCCC GAACCCGAGA GCGCGGAACT CGAGGAACAG GGGCTAGGCT GGAAGAACAG TTATGGCTCC GGCAAGGGCG CCGACACCAT CACGAGCGGC CTTGAAGTCA CCTGGACCAC CACGCCGACG AAGTGGAGCA ACAACTTCTT CGAGAATCTG TTCAAGTACG AATGGGAACT GACCAAGAGC CCGGCCGGCG CCAATCAATG GGTCGCCAAA GGTGCCGACG AAACGATCCC GCACGCTCAC GATCCCTCGA AGAAGCAGCG CCCGACCATG CTCACCACCG ACCTCTCGCT GCGCTTCGAT CCGGCCTACG AGAAGATTTC GCGGCGCTTC CTGGAAAATC CCGATCAGCT CGCCGACGCC TTCGCGCGCG CATGGTTCAA GCTGACGCAC CGCGACATGG GACCGCGCGC CCGCTATCTC GGACCGGAAG TGCCCGCCGA AGAACTGATC TGGCAAGACC CGATTCCGGC AGTCAACCAC CCGCTGGTCG ACGAACAGGA CATCGCCTCG CTCAAGCAAA AGATCCTGGC CTCGGGGCTG TCGGTGTCGC AACTGGTGTC GACTGCCTGG GCGTCGGCGT CCACGTTCCG CGGCTCGGAC AAGCGCGGCG GCGCCAACGG TGCGCGTATC CGCCTCGCTC CGCAGAAAGA TTGGGCGGTC AACCAGCCCG AGCAGTTGTC GAAGGTGCTG AAGACGCTCG AAGGCATCCA GAGCGAGTTC AACGGCGCGC AGTCCGGCGG CAAGAAGGTG TCGCTCGCCG ACCTGATCGT GCTGGCCGGC AGTGCGGGCA TCGAGCAGGC GGCAAAGAGC GCCGGCCATC AGGTGACGGT GCCGTTTGCG CCGGGACGCA TGGACGCGTC ACAGGACCAG ACCGATGTGG AGTCCGTCGG CGCGCTCGAA CCCGTCGCCG ATGGTTTCCG CAATTACGTG AGGAGCGACA TCAAGGTCCC GCCTGAGGCA TTGCTGATCG ACAAGGCGCA ATTGCTGACG CTAACAGCGC CGGAAATGAC GGTGCTGATC GGTGGGCTGC GCGCGCTGAA CGTCGGGACC GGGCAGAATC CGCAAGGCGC CTTTACCGAC AAGCCGGAAA CGCTGACCAA CGACTTCTTC CGCAACCTGC TCGACATGGG TACGGAATGG AAACCGACCT CGCCGGCCCG TCACGCCTTC GAGGGGCGCG ACGCCAAAAC TGGTTCGGTA AAGTGGACCG GCAGCCGCGT CGATCTGGTG TTTGGTTCGC ATGCCCAGTT GCGGGCGCTC TCCGAGGTCT ATGCAAGCGA GGACGGCAAG GAGAAATTCG TCCGCGACTT CGTCGCCGCA TGGGTCAAGG TGATGAACCT CGACCGCTTC GACCTCGCCT GA
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Protein sequence | MSSEAKCPFN HAAGGGTTNR DWWPKQLRLD LLSQHSSKSD PLDGSFNYAE AFKTLDLAAV KKDLAALMTD SQDWWPADFG HYGPLFIRMA WHSAGTYRIG DGRGGAGRGQ QRFAPLNSWP DNVSLDKARR LLWPIKQKYG QKISWADLLI LTGNVALETM GFKTFGFAGG RPDTWEPDQD VYWGNEKTWL GGDVRYGKGA AGNEEDGGVI VADVEKHGEE VSRDDNGRIL ENPLGAVQMG LIYVNPEGPD GNPDPLAAAH DIRETFARMA MNDEETVALI AGGHTFGKTH GAGPADNVGP EPESAELEEQ GLGWKNSYGS GKGADTITSG LEVTWTTTPT KWSNNFFENL FKYEWELTKS PAGANQWVAK GADETIPHAH DPSKKQRPTM LTTDLSLRFD PAYEKISRRF LENPDQLADA FARAWFKLTH RDMGPRARYL GPEVPAEELI WQDPIPAVNH PLVDEQDIAS LKQKILASGL SVSQLVSTAW ASASTFRGSD KRGGANGARI RLAPQKDWAV NQPEQLSKVL KTLEGIQSEF NGAQSGGKKV SLADLIVLAG SAGIEQAAKS AGHQVTVPFA PGRMDASQDQ TDVESVGALE PVADGFRNYV RSDIKVPPEA LLIDKAQLLT LTAPEMTVLI GGLRALNVGT GQNPQGAFTD KPETLTNDFF RNLLDMGTEW KPTSPARHAF EGRDAKTGSV KWTGSRVDLV FGSHAQLRAL SEVYASEDGK EKFVRDFVAA WVKVMNLDRF DLA
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