Gene Bphyt_2066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_2066 
Symbol 
ID6282234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp2330716 
End bp2331207 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content59% 
IMG OID642621627 
ProductCBS domain containing protein 
Protein accessionYP_001895693 
Protein GI187924051 
COG category[R] General function prediction only 
COG ID[COG0517] FOG: CBS domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.00480753 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCATCGG TTGCACAGTT CCTGCGTTCA AAAGCGTCCC AGACAGTATG GTCGACCCAG 
GCATCCACTT CGGTTTACGA CGCGGTCGCG ATCATGGCTC ACCGGCGCGT GGGCGCGCTC
ATCGTCGTCC ATGAGGGGCG CGTGGCCGGC ATCGTCACGG AGCGCGACTA CGCGCGCAAG
ATCGCGCTCA TGCACCGCTC ATCAAGGAAT ACGCCGGTGC GCGACATCAT GTCGACGACT
GTGCGCTATG TCGGCCCGGG GCAGACCACC GAGGAATGCA TGGCGCTCAT GACGGAATAC
CGGATTCGCT ATTTGCCTGT CATTACGGAA GGACAGGTGA TCGGCATGGT GTCGATCGGC
GATCTGATCA AGAACCTGAT TGCCGAGCAG GAAGACACAA TCCGGCAATT GGAGCATTAC
ATCCATGGCA ACACTGTTCA GGTTGGTCAG CGTGGCTTTC AAACGCACTC ACCAGCCGGT
TTTGCCACCT GA
 
Protein sequence
MASVAQFLRS KASQTVWSTQ ASTSVYDAVA IMAHRRVGAL IVVHEGRVAG IVTERDYARK 
IALMHRSSRN TPVRDIMSTT VRYVGPGQTT EECMALMTEY RIRYLPVITE GQVIGMVSIG
DLIKNLIAEQ EDTIRQLEHY IHGNTVQVGQ RGFQTHSPAG FAT