| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2057 |
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| Symbol | |
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| ID | 6283014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 2323605 |
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| End bp | 2325344 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642621620 |
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| Product | D-lactate dehydrogenase |
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| Protein accession | YP_001895686 |
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| Protein GI | 187924044 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00328651 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCAGCAG CGCACACACC GTTAGTCACT GCCCGCCCCA ACGTAGCCCA CAACTTGATC
GCGGAGCTAC GCGGCATCGT CGGCGGGAAA CACACGCTGA CCGATGACGC CGCGACCCGC
CGCTTTCGGA CCGGCTTTCG CTTTGGCGCA GGCAAGGCGC TCGCGGTGGT GCGCCCCGGT
ACGATCGTCG AGCAATGGAA AGTGCTGCAG GCATGCGTCG CGGCGAACGT GATCGTGATC
ACGCAGGCAT CGAACACGGG CCTCACGGGC GGCTCGACGC CGGACGGCGA CGACTACGAT
CGTGACATCG TGATCGTCAG CACGAGCCGC ATGAAGAAGG TGTTCGTGAT CGACGGCGGC
AAGCAGGTCG TCTGCCTGCC CGGCGCGACG CTCGACCAAT TGGAAAGGAC ACTGAAGCCG
CTTGGCCGGG AACCGCATTC GGTGATTGGC TCAAGTTGCA TCGGCGCATC GGTATTCGGC
GGTGTCTGCA ACAACTCGGG TGGTGCGCTG GTGCAGCGCG GCCCGGCGTA TACGGAAATG
GCGGCGTTTG CGCAGATCGA CAAAACGGGC AAGCTGCAGT TCGTCAACCA TCTCGGGATC
CGGCTCGGCG AAACGCCCGA AGATATGCTT GGCCGGCTCG AACGCGGTGA GTTCTCGGAT
TCCGATGTCC AGCACGACGC GGGCGCCGGA TCGGACCACG GTTACGCAAG CCATGTGCGT
GAGGTCGATG CCGATACGCC GGCGCGTTTT AACGCCGACC CGCAGCGTCT TTATGAAGCA
TCGGGCTCGG CTGGCAAGTT GATGGTTTTT GCAGTGAGAC TCGACACGTT CCCGATCGAA
CGGAACGCCA AGGTGTTTTA TATCGGCACG AACCAACCTG ACGAGCTCAC CGATATCCGC
CGCCATGCGC TGCACGACTT CAAATTCTTG CCGATCTCGG GCGAATATCT TCATCGGGAT
GCTTTCGACG TCGCCGAAGA GTACGGCAAG GACACCTTTC TGGCGATCAA TTATCTTGGC
ACGTCGCGCC TGCCCGCGCT GTTCGGATTG AAGAGCCGCT GCGATGCGCT GTTCGATCGT
CTCGGCTTTC TCCCTTCCCA TTTCACGGAT CGCGTCATGC AGGCCGCGAG CCGCCTGTTC
CCGAGCCATT TGCCGGCTCG GATGAAACAG TATCGCGACA AATACGAGCA TCACCTGATG
CTGAAGGTTG CAGCCGAAAG CGTCGGCGAA ACCCGTGCGT TCCTCTCTGG GTACTTTGCG
AGCGCCACGG GTGCTTATTT CGAATGCACC GATGAAGAGG GCAGAAAAGC GTTCCTGCAT
CGCTTCGCTG CCGCCGGCGC CGCGGTTCGC TATCGTGCCG TGCATGCCCG CGAGGTCGAG
AATATCGTCG CACTCGACAT CGCATTACGC CGCAACGATC GCGACTGGAT CGAGACGCTG
CCGCCCGAGA TCGAGGAAAC GATTGCCATC AAGCTGTACT ACGGCCATTT CCTGTGCCAT
GTGTTCCACC AGGACTACAT CGTCAGGAAG GGCAACGATT GCCTTGAGGT CGAACATAAA
ATGTGGACAC TGCTGGACCG CCGCGGCGCG GAATATCCGG CGGAACATAA CGTCGGCCAT
CTTTACCACG CGAAGCCGCA GCTTGCAGCG TTCTATCGGC AACTGGATCC TTGCAACTGC
TTCAATCCGG GGATCGGACA GGCGTCGAAG TTCAGAAATT ATCGCGAAGC GGCGGTTTAG
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| Protein sequence | MSAAHTPLVT ARPNVAHNLI AELRGIVGGK HTLTDDAATR RFRTGFRFGA GKALAVVRPG
TIVEQWKVLQ ACVAANVIVI TQASNTGLTG GSTPDGDDYD RDIVIVSTSR MKKVFVIDGG
KQVVCLPGAT LDQLERTLKP LGREPHSVIG SSCIGASVFG GVCNNSGGAL VQRGPAYTEM
AAFAQIDKTG KLQFVNHLGI RLGETPEDML GRLERGEFSD SDVQHDAGAG SDHGYASHVR
EVDADTPARF NADPQRLYEA SGSAGKLMVF AVRLDTFPIE RNAKVFYIGT NQPDELTDIR
RHALHDFKFL PISGEYLHRD AFDVAEEYGK DTFLAINYLG TSRLPALFGL KSRCDALFDR
LGFLPSHFTD RVMQAASRLF PSHLPARMKQ YRDKYEHHLM LKVAAESVGE TRAFLSGYFA
SATGAYFECT DEEGRKAFLH RFAAAGAAVR YRAVHAREVE NIVALDIALR RNDRDWIETL
PPEIEETIAI KLYYGHFLCH VFHQDYIVRK GNDCLEVEHK MWTLLDRRGA EYPAEHNVGH
LYHAKPQLAA FYRQLDPCNC FNPGIGQASK FRNYREAAV
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