Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_2049 |
Symbol | |
ID | 6282256 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 2316559 |
End bp | 2317419 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642621614 |
Product | short chain dehydrogenase |
Protein accession | YP_001895680 |
Protein GI | 187924038 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0000200632 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGTCGGCA AAACGAATTT GGGTGTGGCC CTTGTTACGG GCGCATCTTC AGGCATCGGA CAGGCCGCCG CCGAGCGGCT GGCCGACGCC GGTTATACGG TCTTCGGCAC GAGCAGACGG GCAGCCTATA CGGGGCAGCG ATCCTTCGAA ATGCTGACTC TTGACGTCAC CAGCGATGAA TCCGTCGCGG CGGTGGTCAA CGAAGTCATA CGACGGGCGG GTCGCATCGA CTTGCTGGTG AATAACGCTG GCTTTGGCGT GGCTCCGGCG GGCGCCGAAG AAAGCTCGAT CGAGCAGGCC CGGTCGATCT TCGACACAAA CTTCTTTGGC GTCGTCCGCA TGACCCGCGC CGTCGTGCCC TACATGCGGC ATCAGGGAAG CGGTCGCATC GTCAATATCG GCTCGGTGCT CGGCTTCTTG CCGATGCCTT ACGGGGCGCT CTATGCGGCA ACGAAGCATG CGATTGAAGG ATATTCCGAG TCGCTCGACC ATGAGCTGCG CACTTGGGGC ATACGTGTCT CGGTCATCGA GCCGGCTTAC ACCAAGACGC CGTTCGATGC GAATTTCCTG GAACCCGATG CCAAGCTCGA TGCATACCGC GAGGCTCGTG CGGTCGTCAG CAACCGTGTC AATGAGGTGA TGGCAACGGC TGCGGAGCCC CGCGTCGTGG CCGACGTTGT GCTGAAGGCT GCAGTTGCGG CTCGTCCAAG ACTCCGGTAC ACAGCGGGTG CGCTCGCGGG CCGTCTGCAA TTGCTGCGCA GATTCATGCC AGCGGGTCTG GTGGACGCCG CGCTTCGGAA GGACCTGCGG CTCGGCATGA TACCGTCGCC GAGGTCTGGT AAGCCAGTCC TGCAAAAATA G
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Protein sequence | MVGKTNLGVA LVTGASSGIG QAAAERLADA GYTVFGTSRR AAYTGQRSFE MLTLDVTSDE SVAAVVNEVI RRAGRIDLLV NNAGFGVAPA GAEESSIEQA RSIFDTNFFG VVRMTRAVVP YMRHQGSGRI VNIGSVLGFL PMPYGALYAA TKHAIEGYSE SLDHELRTWG IRVSVIEPAY TKTPFDANFL EPDAKLDAYR EARAVVSNRV NEVMATAAEP RVVADVVLKA AVAARPRLRY TAGALAGRLQ LLRRFMPAGL VDAALRKDLR LGMIPSPRSG KPVLQK
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