| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2043 |
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| Symbol | |
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| ID | 6282212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 2307924 |
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| End bp | 2308706 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642621608 |
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| Product | extracellular solute-binding protein family 3 |
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| Protein accession | YP_001895674 |
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| Protein GI | 187924032 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000000188394 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAATCCC TGCTTGCAAG CCTGAGCATT GCGCTGCTGG CTATCTCGTC CGGCAACGCG
ATCGCGAAGG AATGGTCGAC CGTGCGGTTC GGCGTCGACG CGAGCTATCC GCCGTTCGAA
TCGAAATCCG CCGACGGCAA ACTGGTCGGC TTCGACATCG ACCTGGGCAA TGAAATTTGC
CGCCGCCTGA ACGCGAAATG CGTGTGGGTC GAAAACGCGT TCGACGGAAT GATTCCCGCG
CTGAAGGGGC GCAAGTTCGA CGGCGTGCTG TCGACCATGT CGATGACGCC GGCGCGCCAG
GCGCAGATCG CATTTTCTTC GAAGGTATTC CGTATCCCGA CCCGTCTCGT CGCGAAGAAG
GGTTCGACGA TCACACCCAC GCCGGAAGCG CTGAAGGGCA AGCGAATCGG CGTAGAGCAG
GGCTCGATCC AGGAAACCTA TGCAAAGACT TACTGGGAGC CCGCCGGCGC GGTGATCGTG
GCTTACCAGG ATCAGGATCT CGTTTACTCG GACCTGCTCG CTGGCCGCAT CGATGCATCG
CTGCAGAACG CCGTGCAAGC CGACGTCGGT TTCCTGCGCA CGCCGCGAGG CAAGGACTTT
GCGTTTGCCG GCAACGCGCT CTACGACGCG AAGACGCTTG GAAGCGGCAC GGCGATCGGG
TTGCGCAAGG AAGACACCGA CCTGAAGGCG CAGATCGACA AGGCGATCGC CGACACGCGC
GCGGACGGCA CATACGACAG GATCGCGAAA AAGTACTTCG ACTTCGACGT GTACGGTCAG
TGA
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| Protein sequence | MKSLLASLSI ALLAISSGNA IAKEWSTVRF GVDASYPPFE SKSADGKLVG FDIDLGNEIC
RRLNAKCVWV ENAFDGMIPA LKGRKFDGVL STMSMTPARQ AQIAFSSKVF RIPTRLVAKK
GSTITPTPEA LKGKRIGVEQ GSIQETYAKT YWEPAGAVIV AYQDQDLVYS DLLAGRIDAS
LQNAVQADVG FLRTPRGKDF AFAGNALYDA KTLGSGTAIG LRKEDTDLKA QIDKAIADTR
ADGTYDRIAK KYFDFDVYGQ
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