| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2037 |
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| Symbol | |
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| ID | 6282153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 2303186 |
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| End bp | 2303947 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642621602 |
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| Product | putative transmembrane anti-sigma factor |
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| Protein accession | YP_001895668 |
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| Protein GI | 187924026 |
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| COG category | [K] Transcription |
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| COG ID | [COG5662] Predicted transmembrane transcriptional regulator (anti-sigma factor) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000000000249253 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGACTGGC GATCGCTATC GGCGTTTGCT GACAATGAAC TGTGCGCGTC GGAGCGCGCG
GCCACGCTCG TCTGGCTGGC GACCGACCCC GAGGCGGCTG CACGCGTGGC CGACTACCGC
GCGCAAAAAG CCGCGCTGAC GGCATTGTTC CGGGAGCCGC GAGACGACGC GCGTTACATC
GTCGTCTGCC GCCTCGCGCC GAGATGGCGG CGGGCCGGCC TTGCCGCCTC CTGCATGGCG
ATGGGCGTGG CGCTCGGCTC GTCATCCGCC TGGGTGTCGG CGAAATTCGC GGCGGATACG
CCCGTGTTCG CGGAGCGCGC GGACCTCGCT TTCGCGCTGT ACACGTCCGA CCAACGCCAC
CCCGTGGAGG TCGCGGCGCT GCCACGCGAT CAGCTGGTCA ACTGGTTGTC GCGGCGCCTC
GATCGACGTT TGCCGGTGGC TTCGCTGCGG GGATATGGGT ACGCGCTGAT CGGCGGTCGC
CTGCTGCCCG GCAAATCCGG ACCTGCCGCG CAATTCATGT ATCAGAACAC GGCCGGCGCC
CGCCTCACGA TGTACGTCGA AGCGGTTCCG AAAGATGCGG CGGCATTCCG CCTGTTTCGC
GACGGTGACC GAAGCACGTT CTACTGGGGC AGTCAGGGAA CGGGGTGCGC GCTGACCGGT
CAACTCTCTG AGGCGCAATT GCGGCCCATG GCGATCGACG CGTGCAGCGC GCTCGGGCAA
TCCTTCAAAC GCCGGTTATC GAGCACGGAT CAAAATCCAT GA
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| Protein sequence | MDWRSLSAFA DNELCASERA ATLVWLATDP EAAARVADYR AQKAALTALF REPRDDARYI
VVCRLAPRWR RAGLAASCMA MGVALGSSSA WVSAKFAADT PVFAERADLA FALYTSDQRH
PVEVAALPRD QLVNWLSRRL DRRLPVASLR GYGYALIGGR LLPGKSGPAA QFMYQNTAGA
RLTMYVEAVP KDAAAFRLFR DGDRSTFYWG SQGTGCALTG QLSEAQLRPM AIDACSALGQ
SFKRRLSSTD QNP
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