| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2027 |
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| Symbol | |
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| ID | 6282588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 2290624 |
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| End bp | 2292660 |
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| Gene Length | 2037 bp |
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| Protein Length | 678 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642621592 |
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| Product | cytochrome c oxidase, subunit I |
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| Protein accession | YP_001895658 |
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| Protein GI | 187924016 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.000053383 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCGACC ACGCGAGGCC AGATTCGACA CCAGGCGTAC GGCAAGCCGC AATACAAGGT
GCGGCAACGC CACTCACGCG CACGCCGCGC TACGGCCGCG TCACGCCCGG CAGTGCCGAA
GAAAAGCGTC TGCGCGAGAT ATGGGAAGCG CCGCCGGGTT GGCGCGGCTG GCTCTCGACG
GTCGATCACA AGACCATCGG TCTGCGCTAT CTGGTCACCG CGTTCATCTT CCTGCTGATG
GGCGGCATCG AAGCGCTCAT CATGCGCATC CAGCTGGCGC GGCCCAACGC GACGGTTCTC
ACGCCCGAAC AATACAACCA GCTTTTCACC ATGCACGGCG TGACGATGAT TTTCCTCTAC
GCATTGCCAG TGTTGTCCGG CTTCTCGAAC TATTTGTGGC CACTGGTACT CGGTTCCCGA
GATATGGCAT TTCCACGTTT GAATGCGCTC TCGTACTGGG TGTTCCTGTT TGCCGGCATC
TTCCTGTATG CGAGTTTTCC GACGGGGCAG GCGCCGAATG CAGGCTGGTT CAATTACGCG
CCGCTCTCCG GGCTCGAGTA CAGCACCGGC CCGAATATCG ATGTCTACGC GCTCGGCATG
GTGCTGCTCG GCATCTCCAC GACGGTCGGC TCGATGAACT TCGTGGTCAC GCTGCTGCGG
ATGCGCGCGC CCGGCATGTC GCTGGACCGC ATGCCGGTGC TGGTGTGGGG CACGCTCACG
GCGTCGGGCG GCAATCTGCT GGCGGTGCCG TCGGTGAGCC TGGCGTTCTT TCTGCTGTGG
CTCGACCGGC GCATCGGCAC GCATTTCTTC GACGTGCTGA ACGGCGGACG TCCGCTGCTC
TGGCAACATC TGTTCTGGAT CTTCGCGCAT CCGTGGGTCT ATGCGGTCGT GCTGCCGGCC
ATGGGCATCG TCTCCGATGC GTTGCCGGTA TTTTGCCGGC GGCCGCTGGT CGGCTATGGG
CCCGTCGCGC TCTCGACGGT CGCGACGATG GTGATCGGTT TCGTCGTGTG GATCCACCAT
ATGTTCGCGA CCGGGATTCC GGCGCTTGCG TTGTCGTTTT TCGGCGCGGC CAGCATGGTG
ATCGCGATTC CCAGCGCGGT CGCCACCTTC GCGTGGATCG CGACGATCTG GACCGGCCGG
CCGGTGTTTC GCGTGCCGTT CCTGTTTTTC GCAGGCTTCG TGTTTCTGTT CGTGGTGGGC
GGCGTGTCTG GCGTGATGAC CGCAGCCGTT CCGTTCGACT GGCAGCTCAC CGACACGTAC
TTCGTGGTCG CGCATCTGCA TTACGTGCTG CTTGGCATCA ACGTGTTTCC GGTGATCGGC
GGCATCTATT TCTGGTTTCC GAAATTCACC GGCAGGATGA TGAGCGAACG GCTCGGCAAG
CTCGGTTTCT GGGTGCTGTT CGCCGGTTTC AATATCGCCT TCTTTCCGAT GCATATCGCA
GGGCTGCTCG GCATGCCGCG GCGCATCTAT ACGTATCCCG CCGACATGGG CTGGAATACG
GTGAATCTCG TTACGTCGCT GGGATCGTTT CTGTTCGCGG CGGGCGTGTT GATTTTCATG
ATCGATCTGC TGGTCAGCCT GAAGCGCGGC AAACCGGCCG GCGACAATCC CTGGGACGCG
CCCACGCTCG AATGGTCGGT GAGTTCGCCG CCACCGCCGT ACAACTTCGC GGTAGTGCCG
ACGCTGGCGA GCCGTCATCC GCTATGGGAA GGCCGTATCG AGGAGCCGGG CGTCACGCTT
CACACGCGCT CGCAACTGCA TGAAGGCTAT CTGCTCGCGC AAGGCCGCGA GGCGCTCGGT
ACGAGCGCTC TCGAAGCGAA TCCCGACGTG ATCCTGAAGA TGCCGGGCGA TTCGTATGCG
CCGTTCTGGC TTGCGGTGTT CGCGACGCTG GTGTTCGCGG GACTCGCGAT GAGCGCGTGG
ACATTTGCAG GCGCGATGCT GATGGGGTGT GCAGTGTCGA TCATCGTCTG GCTGTGGCCC
GAACGTGCGT TGATCCAGCG CGCGCCGGCC ACGGTTCATG ACGCGGGGGG AAAGTGA
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| Protein sequence | MSDHARPDST PGVRQAAIQG AATPLTRTPR YGRVTPGSAE EKRLREIWEA PPGWRGWLST
VDHKTIGLRY LVTAFIFLLM GGIEALIMRI QLARPNATVL TPEQYNQLFT MHGVTMIFLY
ALPVLSGFSN YLWPLVLGSR DMAFPRLNAL SYWVFLFAGI FLYASFPTGQ APNAGWFNYA
PLSGLEYSTG PNIDVYALGM VLLGISTTVG SMNFVVTLLR MRAPGMSLDR MPVLVWGTLT
ASGGNLLAVP SVSLAFFLLW LDRRIGTHFF DVLNGGRPLL WQHLFWIFAH PWVYAVVLPA
MGIVSDALPV FCRRPLVGYG PVALSTVATM VIGFVVWIHH MFATGIPALA LSFFGAASMV
IAIPSAVATF AWIATIWTGR PVFRVPFLFF AGFVFLFVVG GVSGVMTAAV PFDWQLTDTY
FVVAHLHYVL LGINVFPVIG GIYFWFPKFT GRMMSERLGK LGFWVLFAGF NIAFFPMHIA
GLLGMPRRIY TYPADMGWNT VNLVTSLGSF LFAAGVLIFM IDLLVSLKRG KPAGDNPWDA
PTLEWSVSSP PPPYNFAVVP TLASRHPLWE GRIEEPGVTL HTRSQLHEGY LLAQGREALG
TSALEANPDV ILKMPGDSYA PFWLAVFATL VFAGLAMSAW TFAGAMLMGC AVSIIVWLWP
ERALIQRAPA TVHDAGGK
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