Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_2025 |
Symbol | |
ID | 6282586 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 2288534 |
End bp | 2289400 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642621590 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001895656 |
Protein GI | 187924014 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.000209901 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCGACA CGCAACGTCC CACGCCACCT TTTCAGAACC AGCAGCAGGA CCAGACACCC GGGCAAACCG CGCCCATGAA ACCGCAACCG GATCACGGCG AGAAGTCGTA TAAGGGCTCT GGACGTCTCG CCGGCAAGGC CGCCATCATT ACCGGCGGCG ATAGCGGAAT TGGCCGCGCG GTCGCGATTG CATTCGCACG CGAGGGCGCC GACGTGCTGA TTTCCTACCT CAACGAAGAC GACGATGCGC GCGAAACCGC GCGCTGGGTC GAGGACGCCG GCCGCAAGGC GTTACTGCTG CGAGGCGACA TCACGAACCC GGCGCATTGC AAGGAGATCG TCGAGCGGGC GTTCGAGGCG TTCGGCCGGC TCGACGTGCT GGTCAACAAT GCGGCCTATC AGATGAGCTA TCCGTCGCTC GAAGACATCA GCGACGAAGA GTGGGACAAG ACCTTCGATA CCAACATCGG TGCGATGTTC AGGATCACGC GGGCGGCGGT GAAGTATATG AAACCGGGTG CGTCGATCGT GAATACGTCG TCGATCAATG CGGATCATCC CAATCCGGGC TTGATCGCCT ACGCGACCAC CAAAGGCGCG ATTCAGAATT TCACCGGCGG CCTTGCTCAA TTGCTGGCGG AGAAGGGCAT ACGGGCGAAC TGCGTCGCGC CGGGGCCGAT CTGGACACCG TTGATTCCAT CGACCATGCC GCCCGAGAAA GTCGAGAAAT TCGGTGAGCA GGTACCGATG AAACGCCCGG GTCAGCCCGC CGAACTGGCC GCTGCCTACG TGATGCTGGC CTCCGACGAA GCCAGCTATA TCTCGGGCGC GACGATCGCG GTGACGGGCG GGGCGCCGAT TATCTGA
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Protein sequence | MTDTQRPTPP FQNQQQDQTP GQTAPMKPQP DHGEKSYKGS GRLAGKAAII TGGDSGIGRA VAIAFAREGA DVLISYLNED DDARETARWV EDAGRKALLL RGDITNPAHC KEIVERAFEA FGRLDVLVNN AAYQMSYPSL EDISDEEWDK TFDTNIGAMF RITRAAVKYM KPGASIVNTS SINADHPNPG LIAYATTKGA IQNFTGGLAQ LLAEKGIRAN CVAPGPIWTP LIPSTMPPEK VEKFGEQVPM KRPGQPAELA AAYVMLASDE ASYISGATIA VTGGAPII
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