| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2015 |
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| Symbol | |
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| ID | 6281069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 2277862 |
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| End bp | 2279733 |
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| Gene Length | 1872 bp |
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| Protein Length | 623 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642621580 |
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| Product | glycoside hydrolase 15-related |
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| Protein accession | YP_001895646 |
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| Protein GI | 187924004 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0969063 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGACC AACGACCTGT TCCACCGAGA CCCGCCCTGC CGACCGACGC CCGCGGCATG
ATCGGCAACA TGAAGACCAC CGCGCTCGTC TCGCTGCGCG GCTCGATCGA CTTCATGTGC
TTTCCGCGCA TCGACTCGCC GGCGATTTTT GCCGGCCTGC TCGAACCGTC GCGCGGCGGC
GCGTTCACGA TCGAACCCAC ATTCGAAGGC GCCAACGTCA AGCAGATGTA TCTGCCCGAC
ACCAACGTCC TGCTGACCCG CTTCATGACG CCCGAGGGCG TGTGCGAGCT GCTGGACTTC
ATGCCGGTGC CCGAGGACGG CAGCGGCGCC GATGCCGCCG CGCCGCTGCC CAACTGCGTG
ATCCGCGTCG TGCGGATCGT GCATGGGCGC ATGGCATTCA GGATGCGTTG CGAGCCGCGC
TTCGACTATG CACGCGGCGC GCACACGGCT CACATCGATA AGAACGGCGG CGTGGACTTC
CACGCCGCCG CCAACGCCGG CAGTGAAAGC GGCACGCAAC TGCGCCTGAA CAGCACCTTG
CCGCTCGCGC TCGACCACGG CGCCGCGCAC GCAGAATTCG AGCTGAGCCA TGGCGAGACG
GCCGGCTTCG TTTTCGGCGA TGCCGAAGGC TTGCGCGAAA AGTCGTTCGA TTGCGAAGCG
GCGTTGACCG ATACGATCCG CTACTGGCGA AGCTGGTCGG CGCAATCCAC CTATCGCGGC
CGCTATCGCG AAGTCGTCAT GCGCTCGGCG CTGACCTTGA AGCTTCTAAG TTCCAGCGAG
CATGGCGCGA TCGTCGCCGC GCCGACCTTC GGGCTCCCCG AAGCGCTCGA CGGTTCGCGC
CGCTGGGACT ACCGCTTCAC ATGGATTCGC GACGCCGCGT TCTCCGTGTA CGCGCTGCTG
CGTCTCGGCT ATACCGGCGA AGCGCGGCAT TTCATGACAT GGATCGCCGG ACGCAGCCGG
CTATGCGATT CGGACGGCTC GCTGAACGTC ATGTACACCA TCGACGGCAA GGAGCCGCCT
GAAGAAACCG AAATCACGGC GCTGTCGAAC GGGAATGGCG TGGCGGGCGT GCCGCTCGTC
GGCAACGCGG CGCGCGACCA GGTCCAGCTC GACGTGTACG GCGCGCTGCT CGACGCGATC
TATCTGTATA ACAAGTACGG CGCCGCGATC TCGCACGACG GCTGGCGCGA CGTCACGCGC
ACGGTCGACT ATGTCGTCGA ACACTGGCGC GAACCGGACC ACGGCATCTG GGAGTTTCGC
AACGGCCTGC GGCCTCTGCT CCATTCGCGG CTGATGTGCT GGGTCACGGT GGACCGCGCG
CTACGTCTCG CGGAAAAGCG TTCTCTGCCT GCGCCGCTCA AACGCTGGTT CGACACGCGC
GACGCCATCC ACGCCGATAT CCACGAGCAC TTCTGGAACG AAGAGCTGAA CGCGTTCGTG
CAGACGCCGG ATTCGCAACG GCTCGATGCG TCCGCGTTGA TGATGCCGCT CGTGCGCTTC
ATCGGCCCGA CCGATCCGCG CTGGCTCGGC ACGCTCGACG CGATCGGCAG CGAACTGAAA
GTGGATCCGC TGATCTTCCG CTACACGCGC GGCACGACGC TCGACGGTTT GCCCGGCATC
GAAGGCGGCT TCAGCGCCTG TTCGTTCTGG TATGCGGAGG CGTTGGCACG CGCCGGACGC
GTCGACGAAG GCCGCCTTGT GTTCGAGAAG ATGCTCGCAT ACGCGAATCA CGTCGGCCTG
TTTTCCGAGG AAGTCGCCAC CAGCGGCGAA GCGCTCGGCA ATTTTCCGCA GGCGCTCACG
CATCTCGCGC TGATCAGCGC GGCGTACCAG CTCGACCGCA ATCTCGACAA GGTTCACATT
CCGTGGACCT GA
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| Protein sequence | MPDQRPVPPR PALPTDARGM IGNMKTTALV SLRGSIDFMC FPRIDSPAIF AGLLEPSRGG
AFTIEPTFEG ANVKQMYLPD TNVLLTRFMT PEGVCELLDF MPVPEDGSGA DAAAPLPNCV
IRVVRIVHGR MAFRMRCEPR FDYARGAHTA HIDKNGGVDF HAAANAGSES GTQLRLNSTL
PLALDHGAAH AEFELSHGET AGFVFGDAEG LREKSFDCEA ALTDTIRYWR SWSAQSTYRG
RYREVVMRSA LTLKLLSSSE HGAIVAAPTF GLPEALDGSR RWDYRFTWIR DAAFSVYALL
RLGYTGEARH FMTWIAGRSR LCDSDGSLNV MYTIDGKEPP EETEITALSN GNGVAGVPLV
GNAARDQVQL DVYGALLDAI YLYNKYGAAI SHDGWRDVTR TVDYVVEHWR EPDHGIWEFR
NGLRPLLHSR LMCWVTVDRA LRLAEKRSLP APLKRWFDTR DAIHADIHEH FWNEELNAFV
QTPDSQRLDA SALMMPLVRF IGPTDPRWLG TLDAIGSELK VDPLIFRYTR GTTLDGLPGI
EGGFSACSFW YAEALARAGR VDEGRLVFEK MLAYANHVGL FSEEVATSGE ALGNFPQALT
HLALISAAYQ LDRNLDKVHI PWT
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