| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2008 |
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| Symbol | |
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| ID | 6284563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 2269366 |
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| End bp | 2270313 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642621573 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_001895639 |
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| Protein GI | 187923997 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.232037 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.400947 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCACA AGCATCAGGA TCCTGGCGCG CGGCAACGCA TGGTGGCCTT GCTTGAAAAT
CTCGCGCCGC TTGAAGGCTA CAACCTCACC GTGCTGCCCG ACGTGCGCTT TCTGCGTTCG
AACCGGCCGC TCAGCCGCAC GCCGGTGCTG TACGACCCCG GCGTGGTGAT CGTCTGCCAG
GGACGCAAGC GGGGCTTTCT CGGCGAGACG GTTTATGTGT ACGACGCGCA GCATTATCTG
GCGGTCTCGG TGCCGGTGCC GTTCTCGATG GAAACCGAAG CAAGCGAGGC CGAGCCCTTG
CTCGCCATCT ATTTCCGCCT CGACTTCAAA CTGGCCGCCG ATCTGATGCT GCAACTCGAC
GAGCGGGACG CGGGCGTGCC GGCCGAACCG CGCGGCATGA TGTCGACGCC GCTCGACCCG
AAGCTAAGCG CCACCGTGTT GCGCTTTCTG GAAGCGATGA GCGTGCCGTT GGAAGCGGAG
CTGCTAGGCC CAGCGCTGGT GCGCGAAATC TACTTCCACG TGCTGACCGG CGAGCAGGGC
GGATCGATGC GCGCCGCGCT GACCGCGCAG GGTCAGTTCG CCCGGATCGC CAAAGTGATC
CGCAAGATTC ACGCGTGTTA TCGCGAACCG CTCGACATCG GGCAGCTCGC GCTGGAGGCG
AACATGAGCG TGCCCAGCTT CCATTCGCAC TTCAAGGCGG TGACGCGTAC GTCGCCGATG
CAATATCTGA AGTCGACGCG GCTTCATCAG GCGCGCTTGC TGATGGTGAG AAACGAGGTG
ACCGCGGCGC ACGCGTGCGT GCAGGTGGGC TATGAAAGCG CCTCGCAATT CAGCCGCGAA
TTCAAGCGCC TGTTCGGCCG CAGTCCGGTC GAGGAGGCCG AACGGATGCG CAGATCCTTC
GCTGTGCCGC CGCCCGCGCC GGGGTCGATC TTCGTCGCGT CGCACTGA
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| Protein sequence | MKHKHQDPGA RQRMVALLEN LAPLEGYNLT VLPDVRFLRS NRPLSRTPVL YDPGVVIVCQ
GRKRGFLGET VYVYDAQHYL AVSVPVPFSM ETEASEAEPL LAIYFRLDFK LAADLMLQLD
ERDAGVPAEP RGMMSTPLDP KLSATVLRFL EAMSVPLEAE LLGPALVREI YFHVLTGEQG
GSMRAALTAQ GQFARIAKVI RKIHACYREP LDIGQLALEA NMSVPSFHSH FKAVTRTSPM
QYLKSTRLHQ ARLLMVRNEV TAAHACVQVG YESASQFSRE FKRLFGRSPV EEAERMRRSF
AVPPPAPGSI FVASH
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