| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2006 |
|---|
| Symbol | |
|---|
| ID | 6284561 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 2266768 |
|---|
| End bp | 2268117 |
|---|
| Gene Length | 1350 bp |
|---|
| Protein Length | 449 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642621571 |
|---|
| Product | Glutamate--putrescine ligase |
|---|
| Protein accession | YP_001895637 |
|---|
| Protein GI | 187923995 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0174] Glutamine synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.349477 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.804087 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCAAAGCA ATCTGCGCGG CGATTTGCGC GAATTCCTGG AGCATCACCG GATCCATGAG
GTGGAGTGCG TGATACCGGA CATGACCGGC GTCGCGCGCG GCAAGATCGT GCCGAAGAAC
CTGTTTCTCT CGGAAGGCAA GATGCATATG TCGAATGCGC TGCTGATGAT CACCGTCAAC
GGCGAATTCG CGAATTTCGA GCGCTTTGTC GGGCCGAGCG ATCCGGACAT GGTCTGCATT
CCCGATCCCA ACACCGTGCG GCTGGTGCCG TGGGCGATCG AACAGGTTGC CGTGGTGATT
CACGATTGCG TCGGGCTGGA CGGCAAGCCG ATCGGCATCT CGCCGCGCGC GGTGTTGCGC
CGCGTGCTGC GGCTTTACGA AGCGCGCGGC TGGCGGCCGG TGGTGGCGCC TGAGATGGAG
TTCTATCTGA TCGCGCAGAA CAAGAATCCG CATGAACCGC TGCGCCCACC GCTCGGCCGC
GCGGGGCGCC ACGAAGCCGG CCGCCAGTCG TTTTCGATCG ACGCGGTCAA CGAATTCGAT
CCGTTCTTCC AGGACCTGTC GCGCTTCTGC GAAATGACCC AGCTCGGCGT CGAAACGCTC
GTGCACGAAG TCGGCGCCGG ACAAATGGAG ATCAACTTTT CGCACGGCGA CGCGCTCGAT
CTCGCCGACC GCGTGTTTCT GTTCAAGCGC GCGGTACGCG AAACGGCCTT CCGACACGGC
ATTTTCGCTA CCTTCATGGC CAAGCCAATG GAGCACGAAC CGGGCAGCGC GATGCATATT
CATCAAAGCA TCGTCGATCG GGAAAGCGGG CAGAACATTT TTTCGCTGCC GGACGGTTCG
GCTAGCCCGC TGTTCTTCAA CTATATCGGC GGCTTGCAGA AGTACATGCC GCAAGCCATG
CCCATGTTCG CGCCGTACGT GAACTCGTAT CGGCGCCTGT CGCGCTTCAC GGCCGCACCG
ATCAACGTGC GCTGGGGTTA CGACAACCGC ACCTGCGGAA TCCGCGTGCC GAACTCAGAG
CCGGACGGAC GGCGGCTCGA AAACCGCGTG CCCGGCGTCG ACGTGAACCC GTATCTCGCC
ATGGCGGCCA CCCTCGCCTG CGGCTATCTC GGCATGGTGG AACAGCAGGA AGCGTCGGCG
CCGATGATCG AAAGCGCCTA CGACCTCGAA TACGAATTGC CGCGCGGTCT CGAAGACGCG
CTCAAGGCGC TGTCGAAATG CACCGAACTG GCCGAGGTGC TCGGCGACAG CTTCGTGCAG
GCGTATTGCG CGGTGAAGGA AAAGGAATTC GAGACCTTCT CGCAAGGCAT TACTGCGTGG
GAACGCGAGC ATCTGCAATT GCTCGTGTGA
|
|---|
| Protein sequence | MQSNLRGDLR EFLEHHRIHE VECVIPDMTG VARGKIVPKN LFLSEGKMHM SNALLMITVN
GEFANFERFV GPSDPDMVCI PDPNTVRLVP WAIEQVAVVI HDCVGLDGKP IGISPRAVLR
RVLRLYEARG WRPVVAPEME FYLIAQNKNP HEPLRPPLGR AGRHEAGRQS FSIDAVNEFD
PFFQDLSRFC EMTQLGVETL VHEVGAGQME INFSHGDALD LADRVFLFKR AVRETAFRHG
IFATFMAKPM EHEPGSAMHI HQSIVDRESG QNIFSLPDGS ASPLFFNYIG GLQKYMPQAM
PMFAPYVNSY RRLSRFTAAP INVRWGYDNR TCGIRVPNSE PDGRRLENRV PGVDVNPYLA
MAATLACGYL GMVEQQEASA PMIESAYDLE YELPRGLEDA LKALSKCTEL AEVLGDSFVQ
AYCAVKEKEF ETFSQGITAW EREHLQLLV
|
|---|
| |