| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2000 |
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| Symbol | |
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| ID | 6282324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 2260919 |
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| End bp | 2262133 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642621565 |
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| Product | porin Gram-negative type |
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| Protein accession | YP_001895631 |
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| Protein GI | 187923989 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.560915 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGACA CTTTCGTCAA GCGCTCGGCG CTTGCGCTGG CCGCGTTCGG CCTTTCGATG
GGCGCGCACG CGCAATCTTC GGTGACGCTT TACGGCACGG TCGACGCCGG CCTCATCTAC
ACGAGCAATC AGCAGACGAC CCTCGCCAAC GGCAGCACCA ACGGACACGC GAACTATCAA
CTCGGAGGCG GCAATCTGGT GCCGTCGCGT TGGGGCTTGA TGGGCACGGA AGATATCGGC
GGCGGCACGA CGGTCAACTT CGCGTTGGAG AACAGCTTTC TGATCGGCAG CGGCGCGATG
CTGCAATCGA ATACGCTGTT CAATCGCAAT GCGTGGGTCG GTGTGAACAA CGCGACGTAT
GGCGCGCTAA CGTTCGGCCG TCAATACGAT CCGTTCTCGG ATTACATGGG TGCGTATGCA
TCGAGTAACA ACTGGGCGAC GCTGTACGGC TCGCATTTCG GAGACGTCGA TAACTTGAAC
GAGGCGTTCA ACTTCAACAA TTCGATCAAG TACATCAGCC CGAGCTTTGG CGGTTTCACG
GTTGGAGGAT TGTTCAGCCT TGGCGGCGTA GCGGGCAATT TTTCGCAGAA CAAGGGCTGG
GCGTTGGCGG CGAATTACGC GCAGGGGCCA TTGTCGTTGA GCGCGGGGTA TCTGGAGTTG
AATCAGCCGT TGCAAGCGGC GCTGGGTGGT ACGAGCAGCT ATATCGGCGA CTTCAGTTGC
GCGAATGCGG ACGCGTCGTA CTGTCTGCTG CAGGATGCGA GCAAGGTGCG GATCTTTGGG
GCAGGGGGTT CGTATTCGTT CGGCAAGGCG AACGTGGCGG TGACTTATAC GCACACGCGG
CTGTCGCAGA GCCAGTACTT TGCGAGCGCG GCACGGCCGG GCGGCGCCGA TGTTTCATTC
GATATCGCCG AGTTGAACAC CACCTATGCG CTTGCGCCCG ATTTGCAGCT TGGGCTGGCC
TATATCTTCA ACGATGTGAA GCCGAGCGGA AGCGGCTCGA CCCGCGTGCA TCAGATCAAT
CTCGGAGCGG TGTATAGCTT GTCGAAACGG ACCGCAGTTT ATGCCGTGGC GATTGGGCAG
AAGTCGTCCG GTGCCGGGTT AGGGGTCGAC GCGGTGACCG GCGCGAGTGA GAACCTCGCG
CAGATTCCGA ACGTGGTGAA TTCGGATACC GATCGGCAGG TCTCGGTGGT TGTGGGGTTG
CGGCACAACT TTTGA
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| Protein sequence | MADTFVKRSA LALAAFGLSM GAHAQSSVTL YGTVDAGLIY TSNQQTTLAN GSTNGHANYQ
LGGGNLVPSR WGLMGTEDIG GGTTVNFALE NSFLIGSGAM LQSNTLFNRN AWVGVNNATY
GALTFGRQYD PFSDYMGAYA SSNNWATLYG SHFGDVDNLN EAFNFNNSIK YISPSFGGFT
VGGLFSLGGV AGNFSQNKGW ALAANYAQGP LSLSAGYLEL NQPLQAALGG TSSYIGDFSC
ANADASYCLL QDASKVRIFG AGGSYSFGKA NVAVTYTHTR LSQSQYFASA ARPGGADVSF
DIAELNTTYA LAPDLQLGLA YIFNDVKPSG SGSTRVHQIN LGAVYSLSKR TAVYAVAIGQ
KSSGAGLGVD AVTGASENLA QIPNVVNSDT DRQVSVVVGL RHNF
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