| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1984 |
|---|
| Symbol | |
|---|
| ID | 6283772 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 2237388 |
|---|
| End bp | 2237741 |
|---|
| Gene Length | 354 bp |
|---|
| Protein Length | 117 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642621549 |
|---|
| Product | nitrite reductase (NAD(P)H), small subunit |
|---|
| Protein accession | YP_001895615 |
|---|
| Protein GI | 187923973 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases |
|---|
| TIGRFAM ID | [TIGR02378] nitrite reductase [NAD(P)H], small subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.288569 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAACG ATCGCCTGCC ACGCTCCTGG ACGCCAGTTT GCCCGCTCGA CGACATCGTG
CCGAACACGG GTGTTTGCGC GCTCGTCAAC GGCGAACAGG TCGCGGTTTT TCACGTGAAC
AACGGTGATG CAGACCCGAT CGTGTACGCG ATCGAAAACT TCGATCCGGG CTCGCAGGCC
GCGGTGCTCT CGCGCGGATT GATCGGCAGC CTCGGCGAAC GCATCGTGGT CGCTTCGCCG
ATCTACAAGC ATCACTTCGA CCTGCGCACC GGGGAGTGCC TCGAAACACC GGCGCATTCC
GTCAGCGCGT TTGCCGCGCG GGTGGAAAAC GGCCAGGTGT GGGTCGCGGT TTGA
|
|---|
| Protein sequence | MNNDRLPRSW TPVCPLDDIV PNTGVCALVN GEQVAVFHVN NGDADPIVYA IENFDPGSQA
AVLSRGLIGS LGERIVVASP IYKHHFDLRT GECLETPAHS VSAFAARVEN GQVWVAV
|
|---|
| |