Gene Bphyt_1980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1980 
Symbol 
ID6283768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp2232076 
End bp2232951 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content67% 
IMG OID642621545 
ProductMOSC domain protein beta barrel domain protein 
Protein accessionYP_001895611 
Protein GI187923969 
COG category[R] General function prediction only 
COG ID[COG3217] Uncharacterized Fe-S protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.446271 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.886457 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGACCA TCAGCGAACT ATTCGTCTAT CCGATCAAAT CCTGCGCGGG CATTGCGCTC 
AACGAGGCGC GGCTGCTTGC CACCGGCCTC GAATACGACC GCTGCTGGAT GGTCACCGAC
CCGGCCGGCG CCATGCTCAC GCAGCGCGCG TATCCACGCA TGGCGCTGAT CAAGGTCGAA
CTCGGCGCCG AGGATCTCGT GATCCGCGCG CCCGGTATGA GCGAGTTGCG CACGCCGCTG
GAAAGCGCGC GGCTCGCGGC GCCGCCCGCG GTAGAAACCA GGGTCTGGCG CGACGCGGCC
TACGGGCTCG ACACCGGCGA CGCATGCGCC GCGTGGTTCT CGACGTTTCT CGGCGTGCCC
GCGCGGCTCC TGCGCTTCGA TCCTGAACGC GAGCGCATCG TCGATCCGGA CTACACGGAG
AGCGTGGGCC GCGCGACCAC CCATTTCGCC GATGGTTTTC CGCTGCTGGT GATCGGCCAG
GCGTCGCTCG ACGATCTGAA CACGCGCCTG AACGGCAAGG GCGCGCCGTC GATTCCGATC
GACCGGTTCC GTCCCAACGT GGTGCTGACG GGGCTCGACG CGTATGAGGA GGACTATGTG
GAGACGCTGA GCGTCGACGG AGAAGCGGGC GGGGGCGCGC AACTGCAACT GGTCAAGCCT
TGCACGCGCT GCCCAATGCC GACCATCGAC CAAGCCAAAG GCGCGCCCGA TCCGGACTGG
CCGAACGAGC CGAGCGACAC GATGAGCGCC TATCGCGCGA ATCCGCAGCG AAACGGCGCG
ATCACGTTCG GCAACAACGC GTTGGTCGCG AGCGGCGCCG GGACGTGGCT GCGCGTGGGG
CAGACTGTGG AAGCGGAACT GGGCTTCGGC GATTGA
 
Protein sequence
MPTISELFVY PIKSCAGIAL NEARLLATGL EYDRCWMVTD PAGAMLTQRA YPRMALIKVE 
LGAEDLVIRA PGMSELRTPL ESARLAAPPA VETRVWRDAA YGLDTGDACA AWFSTFLGVP
ARLLRFDPER ERIVDPDYTE SVGRATTHFA DGFPLLVIGQ ASLDDLNTRL NGKGAPSIPI
DRFRPNVVLT GLDAYEEDYV ETLSVDGEAG GGAQLQLVKP CTRCPMPTID QAKGAPDPDW
PNEPSDTMSA YRANPQRNGA ITFGNNALVA SGAGTWLRVG QTVEAELGFG D