Gene Bphyt_1964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1964 
Symbol 
ID6284784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp2212810 
End bp2213976 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content67% 
IMG OID642621530 
Productglycosyl transferase group 1 
Protein accessionYP_001895596 
Protein GI187923954 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGA GCTCTATCAA ATCGCTGCAG ATCGGGATGC ACTGGTTCCC CGAGCGCGCG 
GGCGGCCTCG ACCGCATGTA CTACTCGCTG GTCGGCGCGC TGCCGGGCGC GGGCGTCGCG
GTGCGCGGCG TGGTGGCCGG CTCGCCCAAA GTGGCGGCCG ACACCGGCGG CGCCATCAAC
GGCTTCGGCT CCGCCGCGCA ATCGCTGCCG CTGCGGCTCA TGGCCGCGCG CCGCGCGCTG
CGTCAGGAAA TCAGCACGTC GCGTCCCGAC GTGATCTCCT CGCACTTCGC GCTCTATACC
TTTCCGGGTC TCGACGTGAC GCGCGGCATT CCGCAGGTTT CACACTTTCA GGGGCCGTGG
GCCGACGAAA GTCATGTGGA AGGCGCCGAC TCGCTCGGCC AGCGCGCCAA GCGCTATCTC
GAGCAATCGG TCTATGCGCG CTCGTCGCGG CTGATCGTGT TGTCGGAAGC GTTCGGCAAG
ATTCTGACTT CGCGCTATCG CATTGCGCCG GACCGTGTGC GCGTGGTGCC GGGTTGCGTC
GATGTCGAGC AGTTCAATCT GCCGATCACG CCCGCCGAGG CGCGTCTGAA GCTGCAATTG
CCGCAGGACC GGCCGATCGT GCTGGCCGTG CGGCGGCTGG TGCGCCGCAT GGGTCTCGAA
GATCTGATCG ACGCGGTGAA ACTGCTCAAG CGTACGGCGC CGGATGTGCT GCTGCTGATC
GCGGGCAAGG GGCGGCTCGA AGGCGAATTG CAGGCGCGCA TCACCGAGGC GGGTTTGGAG
GACAACGTGA AGCTGCTTGG GTTCGTGCCC GATCAGCATC TGGCGGCGCT GTATCGCGCG
GCGAATATCA GCGTGGTGCC GACGGTGGCG CTCGAGGGCT TCGGTCTGAT CACGGTCGAA
TCGCTGGCTT CCGGTACGCC GGTGCTCGTG ACGCCGGTGG GTGGTTTGCC GGAAGCGGTG
GCGGGTTTGT CGCCGAATCT GGTGCTGCCG GAGACGGGCG CGAAGGCCAT CGCCGATGGG
CTCGCAGGCG CGCTCAACGG CACGCTGAAA TTACCGGATG CCGAGGCATG CCGCCGCTAT
GCGCGTGAGA ACTTCGATAA CTCGGTGATC GCGAAGCGGG TGGCGTCGGT GTATGGCGAG
GCGATTGCGG CGGGTGGGGT GCACTGA
 
Protein sequence
MTTSSIKSLQ IGMHWFPERA GGLDRMYYSL VGALPGAGVA VRGVVAGSPK VAADTGGAIN 
GFGSAAQSLP LRLMAARRAL RQEISTSRPD VISSHFALYT FPGLDVTRGI PQVSHFQGPW
ADESHVEGAD SLGQRAKRYL EQSVYARSSR LIVLSEAFGK ILTSRYRIAP DRVRVVPGCV
DVEQFNLPIT PAEARLKLQL PQDRPIVLAV RRLVRRMGLE DLIDAVKLLK RTAPDVLLLI
AGKGRLEGEL QARITEAGLE DNVKLLGFVP DQHLAALYRA ANISVVPTVA LEGFGLITVE
SLASGTPVLV TPVGGLPEAV AGLSPNLVLP ETGAKAIADG LAGALNGTLK LPDAEACRRY
ARENFDNSVI AKRVASVYGE AIAAGGVH