| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1958 |
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| Symbol | |
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| ID | 6281749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 2204183 |
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| End bp | 2205406 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642621524 |
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| Product | polysaccharide export protein |
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| Protein accession | YP_001895590 |
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| Protein GI | 187923948 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.676148 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.565154 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAC TCGCTGCACA CTCATTCGCG AACGGCAAGT CCACGAATCT CAGTTCGAAG
CTCGCCGCCA CGCTTTTGCT GACGTCCTTT CTGTCGGCCT GCGCCACCGC ACCTGGCAAT
TACCTCGATA CGTCCCGTCT GAAAGACGAC GGCCGGCACG ACAGCCAGGC CGCCGAAACC
TATCCGGTCC ATGTGATCGA TGCCGCCGTC GTGACCGCGC AGGCGCAAGC CGCCGCCGCG
AAGACGCAGG TGCTGCCGCC CTCGAACCTG AGCGACCCGT CGCAGTACGT GTACCGCCTC
GCGCCGCAGG ACATTCTCGG CATCACCGTG TGGGATCACC CTGAATTGAC CACGCCGCAG
GGCAGCACGC TGTCGGCGGG CGGCAACACC ACGCAGTCGA TCGGCGGCGC CTTGCAGCAG
CCGTACACGG CCGCGCTGCC GGGCCAGGCC GATCCGTACG GCCAGACCAT CGCTGCCGAC
GGCACGATCT TTTTCCCGTT TGTCGGCCGC ATCAAGGCCG CCGGCAAGAC TGTCGGCGAG
GTGCGCGATC AGTTGAGCAC CGGCCTCGTG CGCTATATCC GCAATCCGCA AGTCGACGTG
CGCGTGCTCT CGTATCGCGG CCAGAAGGTG CAGGTGACCG GCGAAGTGAA GACGCCGGGC
CCGCTCGCGA TGAGCGACGT GCCGCTCACG CTGGTCGACG CGATCACGCG CTCGGGCGGC
ACGAATGCCG ACGCCGATAT TCAGCGCGTG CGTCTCACGC GCAACAACAA ACTCTACGTG
CTCGACGCCG ACCGCATGCT CGATCGCGGC GACACCACGC AAAACGTGAT GCTGCAAAAC
GGCGACGTAA TCAACGTGCC GGACCGCACC GATAGCCGTG TGTTCGTGAT GGGTGAAGTG
AAGACACCGA TCCAGCTGCC GATCATCAAA GGCCGCATGA CGATCGCCGA TGCGCTCACG
CAAGGCGGCG GCATTCTCGA CACCGACGCC AATCCGCGCC AGATCTTCGT GATGCGCGGC
ATGAAGGATC ACCCGACCAC GCCGGACGTG TACCGCCTCG ACATGACGCA GCCGGACGCC
ATCATGCTGT CCTCGCAGTT CCAGTTGCAG CCGCTGGATG TCGTGTATGT GGGCACCGCC
GCGTCGACCA CCTTCAACCG TGTGTTGCAG CAGGTGTTGC CGAGCGTGCA GACCTTGTTC
TACCTGAAAC AGCTGACGCG TTGA
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| Protein sequence | MKKLAAHSFA NGKSTNLSSK LAATLLLTSF LSACATAPGN YLDTSRLKDD GRHDSQAAET
YPVHVIDAAV VTAQAQAAAA KTQVLPPSNL SDPSQYVYRL APQDILGITV WDHPELTTPQ
GSTLSAGGNT TQSIGGALQQ PYTAALPGQA DPYGQTIAAD GTIFFPFVGR IKAAGKTVGE
VRDQLSTGLV RYIRNPQVDV RVLSYRGQKV QVTGEVKTPG PLAMSDVPLT LVDAITRSGG
TNADADIQRV RLTRNNKLYV LDADRMLDRG DTTQNVMLQN GDVINVPDRT DSRVFVMGEV
KTPIQLPIIK GRMTIADALT QGGGILDTDA NPRQIFVMRG MKDHPTTPDV YRLDMTQPDA
IMLSSQFQLQ PLDVVYVGTA ASTTFNRVLQ QVLPSVQTLF YLKQLTR
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