| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1946 |
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| Symbol | |
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| ID | 6284271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 2189548 |
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| End bp | 2190960 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642621512 |
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| Product | alpha,alpha-trehalose-phosphate synthase (UDP-forming) |
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| Protein accession | YP_001895578 |
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| Protein GI | 187923936 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0380] Trehalose-6-phosphate synthase |
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| TIGRFAM ID | [TIGR02400] alpha,alpha-trehalose-phosphate synthase [UDP-forming] |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.354999 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCCGAC TGATCGTCGT GTCGAATCGC GTCGCAACGC CGACGGAAAC CAAGGGCTCA
GCCGGCGGCC TCGCGGTCGG CGTATTCGGC GCGCTGAAGG ATGCCGGGGG CGTGTGGTTC
GGCTGGAGCG GCGACGTGGT CAGCGAGACC GTCGCCAACG CAGGCCCGAC GCTGGAGCAG
GACGGCGCGG TGACCTTTGC GACCGTCGGT CTGACGCGCA AGGATTACGA CCAGTACTAT
CGCGGCTTTT CGAACGCGAC GCTGTGGCCG GTGTTCCACT ACCGCAACGA CCTCGCACGC
TACGAGCGCG AGGAATACGC GGGCTACCGG CGCGTCAACG CATGGCTCGC GCACAAGCTG
ATCAAGCTGC TCGAACCCGA CGACGTGATC TGGATTCACG ACTACCATCT GATCCCGTTC
GCCGAGGCGC TGCGCAACGA GGGCATCACG AACCGCATCG GCTTCTTCCT GCACATTCCG
TTTCCCGCGC CGCAGATCCT GCTCAACATT CCGCCGCATG AAGAGCTGGT GAAGTCGCTG
TCGTGCTACG ACCTGCTGGG CTTCCAGACC GCCACCGACG AACTCGCCTT CAAGGACTAC
GTTACGCGCC ACGCGCGCGG CACGGTGGGC GCGGACGGCG TGGTCGAAGC ATTCGGCCGC
AAGCTGCGTA CGGGCGTCTA CCGGATCGGC GTGTTCCCCG ACGAAATCGC CGAGCAGGCA
AAGCGCTACG AAAGCCGTCA GCACGTGCTC GACCTGAAGC AGAGCCTGGA AGGGCGCAAG
CTGATCATGA GCGTCGACCG GCTCGATTAC TCGAAGGGTC TCGTCGAACG GTTCCGCGCG
TTCGAACATC TGCTGGAGCG CTCGCCGGAA TGGCGCGGCA ACGTCACGCT GGTGCAGATC
GCGCCGCCGA CCCGCTCGGA CGTCGCTACC TATCAGAAAA TTCGCCAGGA TCTGGAGTAC
GAAGCAGGGC GCATCAACGG CCGCTACTCG GGGCTCGACT ACACGCCGAT CCGTTATCTG
AACCAGCAGT ACGACCGCTG GAAGCTGATG TCGCTGTTTC GCGAATCGCA GATCGGTTTC
GTCACGCCGT TGCACGACGG CATGAATCTG GTCGCGAAAG AATATGTCGC CGCGCAGAAC
CCCGAGGACC CTGGCGTGCT GGTGCTGTCG ATTTTCGCGG GCGCGGCGGC GGAGCTGACC
GGCGCGCTGC TGGTCAATCC ACACGATGCG ATCGGCATGT GCGAAGCGTT GCAGCGCGCG
CTGCAAATGC CGCTCGACGC GCGCCAGCGG CGTCACGAGA TCAACATGGC GGCGCTGCGC
GAAAACGATC TCGGTGTGTG GCGCGATACC TTCCTGCGCG ATTTGCGCAG CGTGCCGGCG
CAGAAACCGG GCAAGGGCGG CGGGCATAAG TGA
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| Protein sequence | MGRLIVVSNR VATPTETKGS AGGLAVGVFG ALKDAGGVWF GWSGDVVSET VANAGPTLEQ
DGAVTFATVG LTRKDYDQYY RGFSNATLWP VFHYRNDLAR YEREEYAGYR RVNAWLAHKL
IKLLEPDDVI WIHDYHLIPF AEALRNEGIT NRIGFFLHIP FPAPQILLNI PPHEELVKSL
SCYDLLGFQT ATDELAFKDY VTRHARGTVG ADGVVEAFGR KLRTGVYRIG VFPDEIAEQA
KRYESRQHVL DLKQSLEGRK LIMSVDRLDY SKGLVERFRA FEHLLERSPE WRGNVTLVQI
APPTRSDVAT YQKIRQDLEY EAGRINGRYS GLDYTPIRYL NQQYDRWKLM SLFRESQIGF
VTPLHDGMNL VAKEYVAAQN PEDPGVLVLS IFAGAAAELT GALLVNPHDA IGMCEALQRA
LQMPLDARQR RHEINMAALR ENDLGVWRDT FLRDLRSVPA QKPGKGGGHK
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