| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1943 |
|---|
| Symbol | |
|---|
| ID | 6282401 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 2186252 |
|---|
| End bp | 2186977 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642621509 |
|---|
| Product | Ankyrin |
|---|
| Protein accession | YP_001895575 |
|---|
| Protein GI | 187923933 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0666] FOG: Ankyrin repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.579391 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGTTTG CTGAGAAACA AGACACTTTC ACCGCGCGTG GCGCGCTGGC TTCGGCACGG
CGTGGCGCCG CGCGCGTCGC GTTCGCGGCC GCGCTGGCTT GTGCCGCGCT GACTTCGTTG
ATGGTGTCGC CGGCTCAGGC TGCGCCGATC GATTCGCTGA TCAAGTCGGT CAAGTTCGAC
GACGTCGACG GCGTCAACAA GCTGCTCGCC AAGGGCATGG ACCCGAATAG CGTGGACAAC
CAGGGCATTC CGCTGCTGGT GCTGGCCGCG CGCGAGAAAT CGGACAAGGT CGGCGCCGCG
CTGGTCGCCA ATCCGAAGAC CAACATCGAG ATTCAGGACA AAGCCGGCGA GAACGCGATG
ATGATGGCCG CGCTGAACGG CGACCTTGAC TTCGTCAATC TGCTGATCGC GAAAGACGCC
GAGGTCAACA AGAAGGGCTG GGCGCCGCTG CACTACGCGG CCGCGAACGG GCATGACGAT
ATCGTGAAGG TGCTGCTCGA CCATTCGGCC TACGTCGACG CAGGATCGCC GAACGGCACC
ACGCCGCTGA TGATGGCCGC GCGCGGCGGC CACGTATCGA CGGTAAAGCT GCTGCTCGAC
AACGGGGCGG ATCTGACGGT GAAGAACCAG ATCGGCATGA CGGCGCTCGA TTTTGCCAAG
ACCTACAAGG AGCCGGACGT GGTCGAAGGG CTGACCGCGC GCCTGCAACA GATGCAACCG
AAGTGA
|
|---|
| Protein sequence | MSFAEKQDTF TARGALASAR RGAARVAFAA ALACAALTSL MVSPAQAAPI DSLIKSVKFD
DVDGVNKLLA KGMDPNSVDN QGIPLLVLAA REKSDKVGAA LVANPKTNIE IQDKAGENAM
MMAALNGDLD FVNLLIAKDA EVNKKGWAPL HYAAANGHDD IVKVLLDHSA YVDAGSPNGT
TPLMMAARGG HVSTVKLLLD NGADLTVKNQ IGMTALDFAK TYKEPDVVEG LTARLQQMQP
K
|
|---|
| |