Gene Bphyt_1941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1941 
Symbol 
ID6282399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp2184834 
End bp2185358 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content66% 
IMG OID642621507 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001895573 
Protein GI187923931 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.325665 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTTT CCTACCGCGA TGCCACGCTC GACGATCTGC CCGCGATCGT CGCCATCTAC 
AACTCGACTG TGCCGTCGCG GCAAGTCACG GCCGATCTCG ATCCGGTCAG CGTCGAAAGC
CGGATGGGCT GGTTTCATGC GCATGGTCCG CAAAAGCGGC CGCTGTGGGT GGTGGAAGCT
ACGGAGCAGC CCGGCCGCGT GATCGCTTGG CTGAGTTTTT CGGACTTCTA CGGCCGTCCC
GCTTATCAGC GCACCGCCGA AGTCAGCATC TATCTCGACG AAAGCGCGCG CGGCCGCGGC
CTTGGCAAGC AATTGCTCGC GGCTTCGCTG GCGGCAGCGC CGGCGCTCGG CATCGACTCC
GTGCTCGGCT TTATCTTCGG CCACAATGAG GCGAGCTTGC GCCTGTTCCG CGGCTTCGGT
TTCGACACGT GGGGCTCGTT GCCGCGCGTG GCCGTGCTGG ACGGCGTGGA GCGCGATCTG
GTGATTCTCG GCAAACGCCT GGACTCCGCA GCAGCCGCCG CCTGA
 
Protein sequence
MSLSYRDATL DDLPAIVAIY NSTVPSRQVT ADLDPVSVES RMGWFHAHGP QKRPLWVVEA 
TEQPGRVIAW LSFSDFYGRP AYQRTAEVSI YLDESARGRG LGKQLLAASL AAAPALGIDS
VLGFIFGHNE ASLRLFRGFG FDTWGSLPRV AVLDGVERDL VILGKRLDSA AAAA