Gene Bphyt_1934 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1934 
Symbol 
ID6284136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp2177821 
End bp2178723 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content67% 
IMG OID642621500 
Producthypothetical protein 
Protein accessionYP_001895566 
Protein GI187923924 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0777827 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.376049 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGAAT TCGCAGGCAA GGTGGCGGTG ATCACCGGTG CGGCGAGCGG TTTCGGCCGT 
GCGTTCGCGC AGAAGGGCGC GTCGCTCGGC ATGAAGCTCG TGCTCGCCGA CGTCAATCCC
GACGCGCTCG CGCAAACCGT CGAGGCCCTG AGTGCCGAGG GCGCCGAGGC GATCGGCGTG
CCGACTGATG TCGCCAGCGC GGCGCAGGTC GAAGCGCTCG CGCAAGCGGC GCTCGACGCC
TATGGCCGCG TGCACCTGCT GTTCAACAAT GCGGGCGTGG GCTCGGGCGG CTTCCTGTGG
GAAAGTTCGG CGAACGACTG GTCCTGGGTG TTCGGCGTGA ACGTGATGGG CGTCGCGCAC
GGTGTGCGGG TCTTCACGCC GATCATGCTG GCGCAAAACG AGCCGGCGCA TATCGTCAAC
ACGGCGTCCG TCGCGGGGTT GTTGTCGCCG CCTGCCATGG GCATCTACAA CGCGTCGAAG
CATGCCGTGG TGTCGCTCAC CGAAACGCTG TATCACGACC TGCAGTTGGC GCAAGCCGGC
CAGGCGGAAA CGGGAACGGA AGCGGGTGGC CTGGTCGGCT GTTCGCTGCT GTGCCCGGCC
TTCGTGCCGA CCGGCATCGC CGATGCGGAA CGCGCGCGCC CCGCGGACCT GCGCAACGAC
AGCGGACCGA CGCGCTCGCA GATCGCCGCG GGCAAGCAAC TACAGCGCGC CGTGCAATCG
GGCAAGCTGA ATGCCGGCGA TGTCGCTGAC ATCACCTTCG AAGCGATCGC CGCGCGGCGT
TTCTATATCG TCACGCATCC GGGCATCATG GCGACGGTGA AGCTGCGTCA CGAGGACATC
GAGCAGTTGC GCAATCCCAC CGACCCCATG TCGCTCAAGC CGGAAGTGAA CAACGCCGGT
TAG
 
Protein sequence
MFEFAGKVAV ITGAASGFGR AFAQKGASLG MKLVLADVNP DALAQTVEAL SAEGAEAIGV 
PTDVASAAQV EALAQAALDA YGRVHLLFNN AGVGSGGFLW ESSANDWSWV FGVNVMGVAH
GVRVFTPIML AQNEPAHIVN TASVAGLLSP PAMGIYNASK HAVVSLTETL YHDLQLAQAG
QAETGTEAGG LVGCSLLCPA FVPTGIADAE RARPADLRND SGPTRSQIAA GKQLQRAVQS
GKLNAGDVAD ITFEAIAARR FYIVTHPGIM ATVKLRHEDI EQLRNPTDPM SLKPEVNNAG