Gene Bphyt_1933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1933 
Symbol 
ID6284135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp2176764 
End bp2177762 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content64% 
IMG OID642621499 
ProductAlcohol dehydrogenase zinc-binding domain protein 
Protein accessionYP_001895565 
Protein GI187923923 
COG category[R] General function prediction only 
COG ID[COG2130] Putative NADP-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.781378 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.639986 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCAGA TCAACCGTCA ACTCGTGCTG GCGTCGCGCC CACAAGGCGC CGTGACGCCC 
GATAATTTCC GTCTCGTCGA AACACCGCTC GCTCCGCTGG CCGACGGCGA ATTGCGCGTG
CGCAATCACT ACCTGTCGCT CGACCCGTAC ATGCGCGGGC GTATGAACGA CAGCAAGTCC
TACGCGGCGC CGCAACCGCT GGACGAAGTG ATGATCGGCG GCACGGTCGG CGAAGTGGTG
GAGTCGAAGA ATCCGAAGTT CGCGGTCGGC GACAAGGTCG TCGCAATGTT CGGCTGGCAG
GAATACGGCA CCTCGAACGG GACCGGCGTG CAGAAAGTCG ACGACACGCA TGTGCCCTTG
TCGGCCTATC TCGGCCCGGT CGGCATGCCG GGTGTCACCG CGTGGTACGG GCTGAATCGC
ATCATCGTGC CGAAAGCAGG CGAGACAGTG GTAGTCAGCG CGGCGAGCGG CGCGGTGGGC
AGCGTGGTCG GCCAACTGGC GAAGCTGGCT GGCGCGCGCG CGGTCGGCAT CGCCGGCGGC
GCGGACAAGT GCCGCTATGT AACGGAGACG CTCGGCTTCG ACGCCTGCGT CGATTACAAG
GCCGGCAATC TCTATCAGGA CCTCAAGGCC GTGACGCCGA ACGGCGTGGA TGGCTACTTC
GAAAACGTCG GCGGTGCGGT GCTCGACGCG ACGCTTGCGC GCATGAATGC GTTCGGCCGG
ATCGCGCTGT GCGGGTTTAT CGCGGGCTAC GATGGCGAGC CAGTGCCGCT CAAGCATCCG
TCGCTGATCC TCACGCAGCG TCTGCTCGTG CAAGGCTTTA TCGTCAGCGA GCATATGGAC
GTGTGGCCGG AGGCGCTCAA GCAACTCGGC ACGCTGGTCG CGCAAAAGAA GCTGGCGTAT
CGCGAAAGCA TCGCGCAAGG ACTCGAAGCC GCGCCCGAGG CGTTCATCGG TCTGCTCAAA
GGCAAGAACT TCGGCAAGCA ACTCGTCAAG CTGATCTGA
 
Protein sequence
MPQINRQLVL ASRPQGAVTP DNFRLVETPL APLADGELRV RNHYLSLDPY MRGRMNDSKS 
YAAPQPLDEV MIGGTVGEVV ESKNPKFAVG DKVVAMFGWQ EYGTSNGTGV QKVDDTHVPL
SAYLGPVGMP GVTAWYGLNR IIVPKAGETV VVSAASGAVG SVVGQLAKLA GARAVGIAGG
ADKCRYVTET LGFDACVDYK AGNLYQDLKA VTPNGVDGYF ENVGGAVLDA TLARMNAFGR
IALCGFIAGY DGEPVPLKHP SLILTQRLLV QGFIVSEHMD VWPEALKQLG TLVAQKKLAY
RESIAQGLEA APEAFIGLLK GKNFGKQLVK LI