| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1930 |
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| Symbol | |
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| ID | 6284324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 2173631 |
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| End bp | 2175127 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642621496 |
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| Product | transcriptional regulator, GntR family with aminotransferase domain |
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| Protein accession | YP_001895562 |
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| Protein GI | 187923920 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.199389 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCAAT CCATCCTGAC CCGGCAGGCA GCGCCTGCGG ACCGGCTGCC GGATAGCCAG
CCTCTGTATC GGCAATTGGC TGATCAATAC CGGCGCGCGA TCGGCAGCGG CGTGCTGCGT
CCGGGCGACC GCATGCCGTC GATGCGCGCA TTCATGCAGC GCCACGGCGT CAGCCTCGCC
ACGGCCACCG AGAGCTACCG CGTGCTGGAA CGCGATGCAC TGATCGATGC CCGGCCGCGT
GCCGGTTACT TCGTGCGCGT GCCACCCACC GCGGCCTTGC CGGCCGCGTC CGAGCCCGAC
CTGGCGACAC TGCCGGGCGC CGCGCAGTTC GTCGGTATTC ACTCGGTGAT TTCCTCGATT
GTGTCGACAT TCCAGCGCTA TCCGGACGCG CTGAATCTCG GCGGCGCGAC GGCATCACCC
GATCTGTATC CCACGGACGC GTTGCAGAAA GCCGCGCTGC GCGCGCTGCG CAAGCGGCCC
ACCTTGCTGA CCGCCGCCGG CCACGACCAG GGCGATCCGG CCTTGCGCGC GATCATTGCG
CGCCGCGCGC TCGACGCCGG CATTCAAATC GGCGCCGACG ACATCATCAT GACCCACGGC
GGCATCGAAG CCGTGAACCT CGCGCTGCGA GCGGTGACGC AACCGGGCGA CACCGTCGCG
GTCGAATCGC CGTGTTTTTT CGGGCTGCTT CAGGCGCTCG AAAGCCTCGG CTTGCGCGCG
CTCGAAATTC CGGCCAGTCC GACCACCGGC CTCGCCATCG AAGCGCTGGC GTTCGCGCTG
CACACGCATC CCGACATCAA GGCCGTGGTC GTGGTGCCGA ACCTGCAGAA TCCGCTCGGC
AGCGTGATGC CCGACACGCA CAAGGCGCGC CTCGTCGAAC TGTGCGCGCA AGCCGGCATT
CCGTTGATCG AAGACGATCC GTACCGCGAA CTGGCCGACG CCGCGCAGCC GCCCAGATCG
CTGAAGGCGT GGGACACCGA CGGCACCGTG ATTCACTGCA CGTCGTTCAA CAAGGTGTTG
GCGCCCGGCA TGCGGGTTGG CTGGATCAAC GGCGGCCGCT GGCATCCGCG CATCGGCATG
CTGAAGTTCG CGCAGTCGCG GCACAACGAA CAGCTGTCGC AAGTCGTGCT CGCCGAATTT
CTGGAAACGA ACGCGTATGA GCGGCATTTG CGGCGTTTGC GCGACCGCTT GCGGCTTCAG
CGCGAACGGA TGGCCGCGGC GATCGCCACC TCGTTTCCCG ACGGCACGCG TTTCACGCCG
CCGCGCGGCG GGATGTTTTT CTGGATCGAA TTGCCGCGTG ACATGTCGTC CACGGTGTTC
TTCAAGGCCG TGCTCGACGA GGGCATTCGC GTGATGCCGG GGACGATGTT TTCAAATGGC
GGGCGCTTCG ATCATTTCAT CCGGCTCAGT TCACCGAGCA CGGATCTCGA TCTGGCCGAC
GAAGCCGTGC GCAGGTTAGG GCGGCTGGCC GCGCGAATGG CGGCTCACCC GGATTGA
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| Protein sequence | MTQSILTRQA APADRLPDSQ PLYRQLADQY RRAIGSGVLR PGDRMPSMRA FMQRHGVSLA
TATESYRVLE RDALIDARPR AGYFVRVPPT AALPAASEPD LATLPGAAQF VGIHSVISSI
VSTFQRYPDA LNLGGATASP DLYPTDALQK AALRALRKRP TLLTAAGHDQ GDPALRAIIA
RRALDAGIQI GADDIIMTHG GIEAVNLALR AVTQPGDTVA VESPCFFGLL QALESLGLRA
LEIPASPTTG LAIEALAFAL HTHPDIKAVV VVPNLQNPLG SVMPDTHKAR LVELCAQAGI
PLIEDDPYRE LADAAQPPRS LKAWDTDGTV IHCTSFNKVL APGMRVGWIN GGRWHPRIGM
LKFAQSRHNE QLSQVVLAEF LETNAYERHL RRLRDRLRLQ RERMAAAIAT SFPDGTRFTP
PRGGMFFWIE LPRDMSSTVF FKAVLDEGIR VMPGTMFSNG GRFDHFIRLS SPSTDLDLAD
EAVRRLGRLA ARMAAHPD
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