| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1926 |
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| Symbol | |
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| ID | 6283601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 2169035 |
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| End bp | 2171119 |
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| Gene Length | 2085 bp |
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| Protein Length | 694 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642621492 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase NAD-binding |
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| Protein accession | YP_001895558 |
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| Protein GI | 187923916 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.856984 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.587057 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGTGG ACTACACAAC TCATGACGGC GTGGCCGTCA TCACGCTGAA CAATCCTCCC
GTGAATGGCC TCGGCCTGTC GACGCGAGCG GGTATCGTCG AAGGGGTCGA GCGCGCGCAG
AACGATCCGG CCATCAAGGC CATCGTGCTG ACCGGCGCAG GCAAGGCCTT CTCGGGCGGC
GCCGATATCA CCGAATTCAA TACGCCGAAA GCGGGCCAGG AGCCGACGCT CGCCACCGTC
ATCAAGATCG TGGAAGGCAG CGCGAAGCCG GTAATCGCGG CGATTCACAG CGTCGCGATG
GGCGGCGGCC TGGAGTTGGC GCTCGGCGCG CATTACCGTA TTGCCGCACC CGGCGCGCAG
ATCGCGCTGC CGGAAGTGAA GCTCGGCATT CTGCCGGGCG CGGGTGGCAC GCAGCGTCTG
CCGCGCGCCA TTGGTCTCGA AGCGGCGCTC AACATGATCG TCTCCGGTGC GCCCGTCATG
TCGGAGAAGC TCGCTGATTC CGGCCTGTTC GACGAACTCG CCCAGGGCGA TCTTGCCGAA
GCAGCGCTGG CGTTTGCCCG CAAGGTCAGC GCGAAGGAAG GCCCGCATCC GAAGGTGCGC
GACCGCAAGA TCGAGCATCC GAACGCTGCC GGCTTCATCC AGTTCGCACG GAACACCGTT
GCCACGATGG CGAAGAATTT CCCCGCGCCG CTGAAATGTA TCGACGCGGT GGAAGCGGGC
GTGCAGAAGG GTTTCGACAA AGGCCTCGCC TTCGAGCGCG AATGCTTCAT GGCGCTCGTG
CAGACGCCGG AAAGCCACGC GCTGCGTCAC GCGTTCTTCG GCGAACGTGC GGCGAGCAAG
ATTCCCGACG TGCCGTCCGA CACGCCGGTG CGCGACATCG GCCAGGTGGC CGTGATCGGC
GCGGGCACGA TGGGCGGTGG CATCGCGATG AATTTCATCA ACGCCGGCAT TCCGGTCACG
CTGCTGGAAA CGAAACAGGA GGCGCTCGAC CGCGGCCTCG CCACGATTCG CAAGAACTAC
GAAGCGACCG TCAAGAAGGG CAAGCTCAAG CCGGAAGTGC TCGGGCAGCG CATGGCGCTA
ATCACGCCCA CGCTTTCCTA CGACGACCTG AAAAACGCCG ACCTGATCGT CGAAGCGGTG
TTCGAAGAAC TTGGCGTGAA AGAGCAGGCG TTCAAGCGTC TGGACGAAGT GGCGAAGCAA
GGCGCGATCC TCGCCTCGAA CACCTCGACG CTCGACGTCG ACAAGATCGC CGCTTTCACG
AAGCGTCCGC AGGACGTGGT CGGCATGCAC TTCTTCAGCC CGGCCAATGT GATGAAGCTG
CTCGAAGTGG TGCGCGGCAA GGAGACGGCG AAAGACGTGC TCGCCACCGT CATGAACCTG
GCGAAAAAGA TCAAAAAGAC CGCCGTGGTT TCGGGCGTGT GCGATGGTTT TATCGGCAAC
CGGATGGTCG AGCAGTACAT CCGCCAGGCG CTCTTCATGC TCGAAGAAGG CGCGCTGCCC
GCGCAGGTCG ACAAAGCAAT CGAGAAGTTC GGCTTCGCGA TGGGTCCGTT CCGCATGAGC
GACCTGGCCG GCAATGACAT CGGCTGGGCG ATCCGCAAGC GCCGTTATCT GGAACATCCC
GACATGCATT ACTCGAAGAT CGCCGATCGT CTTTGCGAGA CGGGGCGCTT CGGCCAGAAG
ACGGGCGGCG GCTGGTACGA CTACAAGGCG GGCGACCGTA CCGCGTATCC GTCGAAAGTG
GTCGACGACA TGATCGTCGC GTTCTCGAAG GAAACCGACA CCGAGCGCCG TAAGATCAGC
GACGAGGAAA TCGTCGAGCG GCTCGTGTTC GCGCTCGTGA ACGAAGGCGC GAAGATTCTC
GAAGAAGGCA TTGCGTCGAA GGCGTCGGAC ATCGACATGG TCTATCTGAC CGGCTACGGT
TTCCCGCTGT ATCGCGGCGG CCCGATGCTG TACGCCGACA CGGTCGGCCT CTACAACGTC
GAGCGCGCGA TTCGCCGCTA TGCGGCGCGG CCGAACGGCG ATGCGTGGCA ACTGGCGCCG
AGCATCGCGG AACTGGCGGC GAAGAACCGC GGGTTCAACG GCTGA
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| Protein sequence | MAVDYTTHDG VAVITLNNPP VNGLGLSTRA GIVEGVERAQ NDPAIKAIVL TGAGKAFSGG
ADITEFNTPK AGQEPTLATV IKIVEGSAKP VIAAIHSVAM GGGLELALGA HYRIAAPGAQ
IALPEVKLGI LPGAGGTQRL PRAIGLEAAL NMIVSGAPVM SEKLADSGLF DELAQGDLAE
AALAFARKVS AKEGPHPKVR DRKIEHPNAA GFIQFARNTV ATMAKNFPAP LKCIDAVEAG
VQKGFDKGLA FERECFMALV QTPESHALRH AFFGERAASK IPDVPSDTPV RDIGQVAVIG
AGTMGGGIAM NFINAGIPVT LLETKQEALD RGLATIRKNY EATVKKGKLK PEVLGQRMAL
ITPTLSYDDL KNADLIVEAV FEELGVKEQA FKRLDEVAKQ GAILASNTST LDVDKIAAFT
KRPQDVVGMH FFSPANVMKL LEVVRGKETA KDVLATVMNL AKKIKKTAVV SGVCDGFIGN
RMVEQYIRQA LFMLEEGALP AQVDKAIEKF GFAMGPFRMS DLAGNDIGWA IRKRRYLEHP
DMHYSKIADR LCETGRFGQK TGGGWYDYKA GDRTAYPSKV VDDMIVAFSK ETDTERRKIS
DEEIVERLVF ALVNEGAKIL EEGIASKASD IDMVYLTGYG FPLYRGGPML YADTVGLYNV
ERAIRRYAAR PNGDAWQLAP SIAELAAKNR GFNG
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