Gene Bphyt_1915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1915 
Symbol 
ID6281290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp2153586 
End bp2155175 
Gene Length1590 bp 
Protein Length529 aa 
Translation table11 
GC content71% 
IMG OID642621481 
Productcarbohydrate kinase, YjeF related protein 
Protein accessionYP_001895547 
Protein GI187923905 
COG category[G] Carbohydrate transport and metabolism
[S] Function unknown 
COG ID[COG0062] Uncharacterized conserved protein
[COG0063] Predicted sugar kinase 
TIGRFAM ID[TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.513601 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGAAG CCGACCACAC GCCGCCGACG CTCATCAGCC CGCACAACCG GGCGCTGCCG 
CTCCTGACGC TCACCGATCT GCGGATCGCC GAATCCCAGG CGGGGGCCGC CTTGCCGAAG
CACACGCTGA TGTCGCGCGC CGGGAAATCC GCCGCGAGCT TCCTGCGCGA GCAGATTACC
CGCGATACCT CGGTCGAGAA ATCGAGGCAG AAGGTGTGGC TGATCGCCGG GCCGGGCAAC
AACGGCGGCG ACGCGCTGAT TCTGGCGATG GAGCTGCACC AGGCCGGCAT TGCCGTCGAA
CTGTGCATGC CGGTCGAGGT GAAACCGGAC GACGCGCGCT GGGCGCTCGA GACGGCCCGC
GCGGCCGGCG TCGCGATCGC CAGTGCGCCG CCCGCGTCGC TGGACGGCTA CAGGTGGCTG
GTGGACGGCA TGTTCGGCAT CGGCCTGACG CGTCCGCTCG AAGGCGTGTT CGCGGCCGTC
GCCCGGCAGC TTTCGCAACG CGCCAAAGCG CGGCCGCGCA AAGGCGGCGT GCTGGCGCTC
GACGTGCCGA GCGGCCTCGA CAGCGACACC GGCACAGTCG TGGGCAATGG CGATGGCGCC
GCCGTCCATG CCACCCATAC GGTCACCTTC ATCGGCGCCA AACCCGGGCT CTTCACCGCG
CAAGGGCGTG ATCTCGCCGG CGCCGTCACG GTCGCGCCGA TCGGCGTCGA CACGAGCGGC
CGCACGGCCG TGCAACTGAA CGCGTCCGAG CTTTTCGGCA CCTTTCTGCC GCCGCGCGAT
TTCGCAACCA ACAAGGGCAG CTTCGGCAGC CTCGCCGTGG TCGGCGGCGA CACCGGCATG
TGCGGCGCGC CGATCCTCGC CTCGCGTGCG GCGCTGTACA CCGGCGCCGG CAAAGTGCAT
GTCGCGTTGC TGGGCGAAGG CGCCCCGCCC TACGATCCGC CGCATCCCGA ACTCATGCTG
CATGCCATCG ACGATCTGCC GCTCGACCAG ATGGACGCGC TCGCCATCGG TTGCGGCATG
GGGCATCGCG AACGCGCCAC GCGCGTGATG CACGACGTGC TGCAACTCGA CGTGCCCAAG
CTGCTCGACG CGGACGCGCT GAACCTGATC TCGAAAGACC CCGCGCTCGC CGCCGAAGTG
ACCGCGCGCG GCGTACAAGG CGATCCATGC GTCCTCACGC CGCATCCGCT CGAAGCCGCC
CGCCTGCTCG GCACCGACGC GCCGGGCGTG CAGCGCGACC GCCTCAGCGC GGCGCGCTCG
CTCGCCGCCC GCTACGCGGC CGTGGTGGTA CTCAAAGGCA CCGGCACCGT CATCGCGGCG
CCGGACGGGC GCCTCGCGAT CAATCCGACC GGCAACGCCG CGCTCGCCAC GGGCGGCACC
GGCGACGTGC TCGGCGGCAT CATCGGCGCC CTGCTCGCGC AACACTTGCC GCGCTACGAA
GCGGCGCTCG CGGGCGTCTA TCTGCACGGC CTCGCCGCCG ACACGCTGAG CGCGCAAGGC
CACGGTCCCG CCGGCCTGAC GGCGGGCGAA CTGGCGCCGA TGGTGCGGAC CTTGCTGAAC
CGCTTGTTCT ATCCGGCAGC GGAGTGCTGA
 
Protein sequence
MTEADHTPPT LISPHNRALP LLTLTDLRIA ESQAGAALPK HTLMSRAGKS AASFLREQIT 
RDTSVEKSRQ KVWLIAGPGN NGGDALILAM ELHQAGIAVE LCMPVEVKPD DARWALETAR
AAGVAIASAP PASLDGYRWL VDGMFGIGLT RPLEGVFAAV ARQLSQRAKA RPRKGGVLAL
DVPSGLDSDT GTVVGNGDGA AVHATHTVTF IGAKPGLFTA QGRDLAGAVT VAPIGVDTSG
RTAVQLNASE LFGTFLPPRD FATNKGSFGS LAVVGGDTGM CGAPILASRA ALYTGAGKVH
VALLGEGAPP YDPPHPELML HAIDDLPLDQ MDALAIGCGM GHRERATRVM HDVLQLDVPK
LLDADALNLI SKDPALAAEV TARGVQGDPC VLTPHPLEAA RLLGTDAPGV QRDRLSAARS
LAARYAAVVV LKGTGTVIAA PDGRLAINPT GNAALATGGT GDVLGGIIGA LLAQHLPRYE
AALAGVYLHG LAADTLSAQG HGPAGLTAGE LAPMVRTLLN RLFYPAAEC