| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1906 |
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| Symbol | clpP |
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| ID | 6284618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 2141995 |
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| End bp | 2142648 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642621470 |
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| Product | ATP-dependent Clp protease proteolytic subunit |
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| Protein accession | YP_001895538 |
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| Protein GI | 187923896 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
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| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.36552 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCTTTC GCGCTCAAAT GCTGGACACG TTGACCTCCC AGTCGTCACG GGATCTCGAA
GCGCAGGCGC TCGGACTGGT GCCGATCGTC GTGGAAACGA GCGGCCGGGG CGAGCGTTCG
TACGACATCT ATTCGCGTCT GCTGAAGGAA CGGATCGTAT TCCTGGTCGG TGAAGTGAAC
GACCAGACGG CCAATCTCGT CGTCGCCCAG ATGCTGTTCC TCGAAAGCGA GAATCCCGAC
AAGGACATCA GCTTCTACAT CAACAGCCCG GGCGGTTCGG TTTCGGCCGG CATGGCGATT
TATGACACGA TGCAGTTTAT CAAGCCGGAT GTCTCCACGC TGTGCATGGG TCTTGCGGCC
AGCATGGGCG CATTTCTGCT TGCGGCCGGG GCGAAGGGCA AGCGTTTTGC CTTGCCGAAT
TCGCGCGTCA TGATTCACCA GCCGCTGGGC GGCGCGCGTG GCCAGGCGTC GGACATCGAA
ATTCAGGCGC GTGAAATCCT GTATTTGAAG GAACGCCTGA ATCATCTGCT CGCGCATCAC
ACCGGCCAGC CGGTCGAGCG TATCGCACGC GACACCGACC GCGACAATTT CATGTCAGGC
GACGACGCGC AAGCTTACGG TCTCGTCGAC CAGGTGGCGC ACAAGCGTCC TTGA
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| Protein sequence | MTFRAQMLDT LTSQSSRDLE AQALGLVPIV VETSGRGERS YDIYSRLLKE RIVFLVGEVN
DQTANLVVAQ MLFLESENPD KDISFYINSP GGSVSAGMAI YDTMQFIKPD VSTLCMGLAA
SMGAFLLAAG AKGKRFALPN SRVMIHQPLG GARGQASDIE IQAREILYLK ERLNHLLAHH
TGQPVERIAR DTDRDNFMSG DDAQAYGLVD QVAHKRP
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