Gene Bphyt_1901 details

Gene Information

• Locus tag: Bphyt_1901
• ID: 6283666
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia phytofirmans PsJN
• Kingdom: Bacteria
• Replicon accession: NC_010681
• Strand: +
• Start bp: 2133172
• End bp: 2136612
• Gene Length: 3441 bp
• Protein Length: 1146 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 642621465
• Product: membrane protein-like protein
• Protein accession: YP_001895533
• Protein GI: 187923891
• COG category: [S] Function unknown
• COG ID: [COG5373] Predicted membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.95592
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 29
• Fosmid unclonability p-value: 0.876478
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGCGTGA TATTGACCGT CCTCGGCGCG GTGGTCGGCA TGCTGACTGC CTTGTCGAAC 
GATTTCTCGA TCGGCCTCGG CGCATTGCTG GGTGCCGTGG CTGGTTTTGC GTTTTCGCGT 
CTTCTGCGAA AGAAGTCTGC GGATACTGCG GCGGGATCCG CGGCCACAGC GGCCACCACG 
GCCACCACGG CCACCACTTC TGGCTCGAAT CCTCAGGGCG AACTGGCGGC GCGCGTCGAG 
CGGCTCGAGC GGGAAGTCGT CGCATTGCGC GGCGAGATTC GTCAGTTGCG AGCGGGAGCC 
GGCGAGGGCG CTCCTGATGC TAATGCGCAG ACTGCTGACA CTGCGGCGTT CAGGCGGTCG 
CCGTCGGATG CAGCGTCGAG TCCTTACGCG ATCCCGCCTG GCAATGAGCG GACAGTACGT 
CCGCAGCCTG AGGTGCCGGC GATGCCACTC GCTGCCGCGC GCTCATCGGC AAGCGCCGAA 
GCGATGGTGC CGGCTGCTGC GAGCGCGGAA GGCGCAACGG GCGCTCGTGG TGCAACAGGC 
GTGTCGAGCG TACCCGTCCC GCCCGGCATG TCTGGCGCCA CTCAAGTCGC TCCGACCGCA 
CAGTCTCTTT CCACGTCAGC GTCGGCGCCG CAGCCTCCCG CTCCACCTTC ACCACCCGCA 
CCTCCACGCG GCCCTGGTCT CGCCGAGCGC CTCTTCAAAG CTGGCCGCGA CTGGCTTTTG 
GGCGGCAACA CGGTCGTGCG GGTCGGCATC ATCGTGCTGT TTTTCGGCAT CGCCTTCCTG 
CTCAAATACG CTGCGGACAA CAGTCTGCTG CCGATCGAAT TCCGCCTCGC CGGCGTGGCG 
CTCGCCGCGA CCGCCCTGAT CGTGCTCGGC TGGCGCATCG GCGAGCGACG CGGCGCCTAT 
GGGCTGGTGC TGCAAGGCGG CGGCGTCGGC GCGCTGTATC TGACCGTCTT CGCGGCCACG 
CGGCTCTACC ACCTGCTACC CGCGGGCGCA GCCTTGCCGC TGATGGTCGC GATCTGCGCG 
CTCAGTGCAT TTCTTGCGGT CCGGCAGAAC GCTTCGTCGC TGGCCTTCAT AGGCAGCGCG 
GGCGGTTTTC TCGCGCCCAT TTTGCTGTCG ACGGGCGGCG GCAGTCACGT CGTGCTGTTC 
AGCTACTACG CGCTGCTCAA CGCCGGCATC TTCGCGATCG CGTGGTTCAA GGCGTGGCGC 
CCGCTGAATC TGCTCGGCTT CGTATTCACG TTTTCGATCG ACGCCGCGTG GGGCGCGACG 
GCCTACCGCC CCGAGTTGCT CGCCAGCACG GAGCCGTTCC TGATTCTGTT TTTCCTGATG 
TACGTCGGCA TCGCGCTGCT CTACGCGGTG CGGCGCGAAA TCGCCCTCAA GCATTACGTC 
GACGGCACGC TGGTGTTCGG CACGCCGCTG GTGGCGATCG GCCTGCAAGC CGCGTTGATG 
AAGAACACCG AGTTCGGCCT GGCGTGGAGC GCGGTGGCGC TCGCCGCGTT CTATCTGGCG 
ATCGCGGGCT GGCTCGCGCG ACGCCGCGAG CGCCTCGGCA TGATGTTCGA GGCCATGCTC 
GCGCTGGCGG TGATCTTTGC CACGCTCGCC GTGCCGCTCG CGTTCACCGG GCCGACCACC 
AGCGCGACCT GGGCCATCGA AGGCGCAGCG ATCAGCTGGC TCGCGGTGCG TCAGCGGCGC 
CTGAGCGCGT TCGGTTTCGG CCTGCTGCTG CAACTGGCCG CGGCGGGCGC CTACGCGGTC 
GGCACGATCG CGCAGACTCA CGACGCGAAC GTCTGGCCGG TCCTGAACGG CGCTTACATC 
GCGTCGGTGT TGATCGCGCT CGCGGGTGTC TTCACGGGGT GGCGTTTGCA CGGCCGCAGC 
GAAGCAGGCG AATGGCATCT GTGGATGCCG CAGATCGGCC TCGTTGCCAG CGTGTGGGGT 
TTGTTGTGGT GGACATTGGG CGGCCTGTAC GAAATCCATG CGTACACGAG CGCTCATCCT 
GGCGTGGAAC ACGCCCGTTT CGATACGGCT GCCGTCGCGC TCTTCGCGGT GCTGACAGCG 
TGGCTCGCGC ACGGCGCGCG CCGCACGCTG CGCTGGCCGC TTGCCGAATG GCCGGCGCTG 
GCGCTCGTGC CGGTTCTCGC GTTGCTTACC GCGCAGCTCT TCACGTTGGG CATGGCGCCG 
GTGAGCGGCT ACGGCTGGCT GGTTGGCGCA CTCGCTGCCT TCTCGGCGTA TGGATTGTTG 
TGGCGCCAGC AGCGTGACGT CAGCGATATC GTGCTCGCGC CGCTGCATAC GCTGATGTTC 
TGGACGGCCG GCGCGCTTGC CGCGCTCGAG GGCTACTGGG GTTTGCGGGC TTACGTGCCC 
GAAGGCGCAT GGAGTTGGAG CGCGTGGGCG TATGGCTTCG GTGTGCTGCT GCTGTTGCTG 
GCGGGCGCCG GGCATCGTCT GCGCTGGCCG GTCGCGCGCT TCATGCGGGC GTATCAGGTG 
TGGGCCGCCG CGCCGCTCGC TGTGCTGCTG TGGGCGTGGA GTATCGCGAG CGTGACGAGC 
GACGGCAGCG CCGCGCCGCT CATGTGGCTG CCGATCCTCA ATCCGCTCGA CGTCGCGCAG 
ATTCTCGCGG TCGTCGCTTG TGCGGTATGG CTGCACAGAC TGCGCGCGTT GGGCGTGCAA 
TGGCATCCGC GCGCCTTCGA TTATCTGGTG CTCGCCACGC TGTTTCTCTG GTTCAACGCG 
CTGCTGTTGC GCACGCTGCA TCATCATTTT CACGCGGCGT ACGATGTCGG TGCGGTGCTC 
GCCTCGTTCG GCCTGCAGCA GGTGTTTCTG GTCGGCTGGA GCGCGTTTGC TTTTGCCGGG 
TTGTGGCTCG CGCGCCGCGA CAGTATCGTG CGGCTGTGCG CGATCGCGTC GACGCCGCTC 
GTGCTGGTGA TGTGGATATG GACGTTCTTC GCGAACCTGA CGCAGGACGG CGGCGCATGG 
GCGCGTCTGC CGTTGCTCAA TCCGCTCGAC CTGGTGCAGG CAGTGGTGTT CGCGCTGGCG 
GCGTTCTGGC TCGTGCGGAT TCACTGGCTC GGCGTGCCGA TCGGCGAATA TCGCATGCCT 
TTGCAGGTGG CGGCCGGCGC GACCGGATTC GTCTGGCTGA ACGCGATGCT GCTGCGTACG 
CTGCATCATT GGACCGGCGT GCCATATGCG TTCGAGACCA TGTCACACTC GATGCTCGTA 
CAGGCGTCAA TATCGGTATT CTGGACGGTG TGTGCGCTGG CCATGATGAT CTGGGCGACG 
CGCCGGGCGA GCCGGATGGT CTGGTTCATC GGCGGCGCGC TGCTGGCGGC GACCGTAGTC 
AAGCTGTTCC TGTTCGACCT GTCTCACATG ACGGGAATCG AGCGGATCGT TTCGTTTATC 
GGCATCGGTT TGATGTTGTT GCTGATCGGC TACTTCTCAC CGTTACCGCC TAAGTCTCTG 
GTCGTGGAAT CCAAGCAATG A 

 

Protein sequence

MSVILTVLGA VVGMLTALSN DFSIGLGALL GAVAGFAFSR LLRKKSADTA AGSAATAATT 
ATTATTSGSN PQGELAARVE RLEREVVALR GEIRQLRAGA GEGAPDANAQ TADTAAFRRS 
PSDAASSPYA IPPGNERTVR PQPEVPAMPL AAARSSASAE AMVPAAASAE GATGARGATG 
VSSVPVPPGM SGATQVAPTA QSLSTSASAP QPPAPPSPPA PPRGPGLAER LFKAGRDWLL 
GGNTVVRVGI IVLFFGIAFL LKYAADNSLL PIEFRLAGVA LAATALIVLG WRIGERRGAY 
GLVLQGGGVG ALYLTVFAAT RLYHLLPAGA ALPLMVAICA LSAFLAVRQN ASSLAFIGSA 
GGFLAPILLS TGGGSHVVLF SYYALLNAGI FAIAWFKAWR PLNLLGFVFT FSIDAAWGAT 
AYRPELLAST EPFLILFFLM YVGIALLYAV RREIALKHYV DGTLVFGTPL VAIGLQAALM 
KNTEFGLAWS AVALAAFYLA IAGWLARRRE RLGMMFEAML ALAVIFATLA VPLAFTGPTT 
SATWAIEGAA ISWLAVRQRR LSAFGFGLLL QLAAAGAYAV GTIAQTHDAN VWPVLNGAYI 
ASVLIALAGV FTGWRLHGRS EAGEWHLWMP QIGLVASVWG LLWWTLGGLY EIHAYTSAHP 
GVEHARFDTA AVALFAVLTA WLAHGARRTL RWPLAEWPAL ALVPVLALLT AQLFTLGMAP 
VSGYGWLVGA LAAFSAYGLL WRQQRDVSDI VLAPLHTLMF WTAGALAALE GYWGLRAYVP 
EGAWSWSAWA YGFGVLLLLL AGAGHRLRWP VARFMRAYQV WAAAPLAVLL WAWSIASVTS 
DGSAAPLMWL PILNPLDVAQ ILAVVACAVW LHRLRALGVQ WHPRAFDYLV LATLFLWFNA 
LLLRTLHHHF HAAYDVGAVL ASFGLQQVFL VGWSAFAFAG LWLARRDSIV RLCAIASTPL 
VLVMWIWTFF ANLTQDGGAW ARLPLLNPLD LVQAVVFALA AFWLVRIHWL GVPIGEYRMP 
LQVAAGATGF VWLNAMLLRT LHHWTGVPYA FETMSHSMLV QASISVFWTV CALAMMIWAT 
RRASRMVWFI GGALLAATVV KLFLFDLSHM TGIERIVSFI GIGLMLLLIG YFSPLPPKSL 
VVESKQ