Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_1893 |
Symbol | |
ID | 6284404 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 2125638 |
End bp | 2126774 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642621457 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_001895525 |
Protein GI | 187923883 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0219464 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.437636 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATTGA CAAGCACCGA TAGCCCCGAC GTGCTGGTGC TCGGCGGCGG CCTGGTCGGT TCGGCCGTGG CCTACGGACT CGCCCGCGAA GGCGCGCGCG TGACCGTACT CGACGAGGAC GACGGCGGCT TGCGCGCGTC GCGCGGCAAT TTCGGCCTCG TCTGGATTCA GGGCAAGGGC TATGGCCTGT CGCCTTATGC ACGCTGGTCG CGCAGTTCGG CCACGCGCTG GCCGGGACTC GCGCAAGCGC TGCATAACGA AACCGGCGTG GACGTGGCGT TGCGCCAGCC GGGCGGCTTC CACTTCTGCT TTAACGACAG CGAACTCGCC GAACGCGAGA AACGCCTCTC GACGTTGCAA GCGGAGCTGG GCGATTACCC CTACCAGATG CTCGACGCCG CCGAAGTCCG CGCGCGCATT CCGCAAATCG GCCCTGCGGT GATCGGCGCG AGCTATTCGC CGATGGATGG TCACGTGAAT CCGCTCAAGC TGCTGCGCGG CCTGCATGCC GCCATGCAGG CGCGCGGCGT GCGGCTCGTG TCGGGCGAAC GCGCGGAGCG CATCGAGCCG CAGGCGCAAG GCTTCGTCGT GCACGGAAAG CGCGGCACGT ATCGCGCGGC GCGCGTCGTG CTCGCCGCGG GCCTCGGCAA TCGCGCGCTC GCGCCGTTCG TCGGACTCGA CGCACCGGTC GCGCCGAATC GCGGGCAGGT GCTGGTGAGC GAACGCGTCG CGCGCTTTCT CGACTATCCG ACGCTCAACG TGCGCCAGAC CGATGAGGGC AGCGTGCAGT TCGGCGATTC GATGGAAGAA GTCGGCTTCA ACGATTTCAC GACCACGCAC GTGCTGGCCG ACATCGCCCG GCGCGGCGTG CGCGCCTTCC CGATGCTGCA GCACGTGCGG CTCGTGCGCA TGTGGGCCGC GTTGCGTGTC TATAGCCCGG ACGGTTTTCC GATCTACGAC CACTCCGAGG CGCACCCCGG CGCATTCGTC GTCACCTGCC ATAGCGGCGT GACGTTGGCG GCCGCGCATG CGCTGCGCGT CGCGCCGTGG ATCATGGGCG CGCCGATGCC CGACGAACTG CCCCACTTTT CCGCGCGCCG CTTCGAGCAC GCCGGTGAAC TGACTCCCGC TCATTGA
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Protein sequence | MTLTSTDSPD VLVLGGGLVG SAVAYGLARE GARVTVLDED DGGLRASRGN FGLVWIQGKG YGLSPYARWS RSSATRWPGL AQALHNETGV DVALRQPGGF HFCFNDSELA EREKRLSTLQ AELGDYPYQM LDAAEVRARI PQIGPAVIGA SYSPMDGHVN PLKLLRGLHA AMQARGVRLV SGERAERIEP QAQGFVVHGK RGTYRAARVV LAAGLGNRAL APFVGLDAPV APNRGQVLVS ERVARFLDYP TLNVRQTDEG SVQFGDSMEE VGFNDFTTTH VLADIARRGV RAFPMLQHVR LVRMWAALRV YSPDGFPIYD HSEAHPGAFV VTCHSGVTLA AAHALRVAPW IMGAPMPDEL PHFSARRFEH AGELTPAH
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