Gene Bphyt_1893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1893 
Symbol 
ID6284404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp2125638 
End bp2126774 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content68% 
IMG OID642621457 
ProductFAD dependent oxidoreductase 
Protein accessionYP_001895525 
Protein GI187923883 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0219464 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.437636 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATTGA CAAGCACCGA TAGCCCCGAC GTGCTGGTGC TCGGCGGCGG CCTGGTCGGT 
TCGGCCGTGG CCTACGGACT CGCCCGCGAA GGCGCGCGCG TGACCGTACT CGACGAGGAC
GACGGCGGCT TGCGCGCGTC GCGCGGCAAT TTCGGCCTCG TCTGGATTCA GGGCAAGGGC
TATGGCCTGT CGCCTTATGC ACGCTGGTCG CGCAGTTCGG CCACGCGCTG GCCGGGACTC
GCGCAAGCGC TGCATAACGA AACCGGCGTG GACGTGGCGT TGCGCCAGCC GGGCGGCTTC
CACTTCTGCT TTAACGACAG CGAACTCGCC GAACGCGAGA AACGCCTCTC GACGTTGCAA
GCGGAGCTGG GCGATTACCC CTACCAGATG CTCGACGCCG CCGAAGTCCG CGCGCGCATT
CCGCAAATCG GCCCTGCGGT GATCGGCGCG AGCTATTCGC CGATGGATGG TCACGTGAAT
CCGCTCAAGC TGCTGCGCGG CCTGCATGCC GCCATGCAGG CGCGCGGCGT GCGGCTCGTG
TCGGGCGAAC GCGCGGAGCG CATCGAGCCG CAGGCGCAAG GCTTCGTCGT GCACGGAAAG
CGCGGCACGT ATCGCGCGGC GCGCGTCGTG CTCGCCGCGG GCCTCGGCAA TCGCGCGCTC
GCGCCGTTCG TCGGACTCGA CGCACCGGTC GCGCCGAATC GCGGGCAGGT GCTGGTGAGC
GAACGCGTCG CGCGCTTTCT CGACTATCCG ACGCTCAACG TGCGCCAGAC CGATGAGGGC
AGCGTGCAGT TCGGCGATTC GATGGAAGAA GTCGGCTTCA ACGATTTCAC GACCACGCAC
GTGCTGGCCG ACATCGCCCG GCGCGGCGTG CGCGCCTTCC CGATGCTGCA GCACGTGCGG
CTCGTGCGCA TGTGGGCCGC GTTGCGTGTC TATAGCCCGG ACGGTTTTCC GATCTACGAC
CACTCCGAGG CGCACCCCGG CGCATTCGTC GTCACCTGCC ATAGCGGCGT GACGTTGGCG
GCCGCGCATG CGCTGCGCGT CGCGCCGTGG ATCATGGGCG CGCCGATGCC CGACGAACTG
CCCCACTTTT CCGCGCGCCG CTTCGAGCAC GCCGGTGAAC TGACTCCCGC TCATTGA
 
Protein sequence
MTLTSTDSPD VLVLGGGLVG SAVAYGLARE GARVTVLDED DGGLRASRGN FGLVWIQGKG 
YGLSPYARWS RSSATRWPGL AQALHNETGV DVALRQPGGF HFCFNDSELA EREKRLSTLQ
AELGDYPYQM LDAAEVRARI PQIGPAVIGA SYSPMDGHVN PLKLLRGLHA AMQARGVRLV
SGERAERIEP QAQGFVVHGK RGTYRAARVV LAAGLGNRAL APFVGLDAPV APNRGQVLVS
ERVARFLDYP TLNVRQTDEG SVQFGDSMEE VGFNDFTTTH VLADIARRGV RAFPMLQHVR
LVRMWAALRV YSPDGFPIYD HSEAHPGAFV VTCHSGVTLA AAHALRVAPW IMGAPMPDEL
PHFSARRFEH AGELTPAH