| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1888 |
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| Symbol | |
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| ID | 6284748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 2121472 |
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| End bp | 2122176 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642621452 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001895520 |
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| Protein GI | 187923878 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.58345 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.358477 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGACA CACCTTCGCA GAAAACCGTT CTCCTCGTCG GCGCGTCGCG CGGCCTTGGT
CTCGCGATGG TCGAGGAGTT TTTGAAGCGC GGCTGCCGGG TCATCGCCAC CGGGCGAGCG
GCTTCGACAG AAAAGCTTCT GCATCTGGCG GAAGCCTTCG CCGGCGCGCT TGAGGTAGAC
ACTGTCGATA TCACGATTCC AGAGCAGATC GCGGCGCTGC GCGCCCGTCT CGAAGGGCGT
CGTATAGATG TGCTTTTCGT GAACGCAGGA GTGGTGAACG CCGATCGTGA AACGCTAGCG
GACGTGTCGA CCGAGGAATT CGTGCGCGTG ATGGTAACGA ACTCGCTGAG TCCGATGAGA
GTCGTCAACG CGTTTCAGGA CCTTGTGCCG CCGACTGGAA CGATCGGTGT CATGTCGTCG
GGGCAGGGCA GTATCGCCAA TGCCACTAAC GCGAACTATG AAGTCTACAG AGGGAGCAAG
GCCGCGCTGA ACATGTTCAT GCGCACCTTC GCGGCGCGCA GCGCCGGCTC TCCGCGCAGC
CTTCTGCTGA TGGCGCCCGG ATGGGTCCAG ACAGACATGG GCGGTCCCAC GGCGCGCTTG
ACCATCGAAG AAAGCATTCC GAACCTCGTC GATACGATCG AGGCATATGA AGGGCGCGCG
GGCTTGCATT ACCTCGACTA TCTCGGACGG CTGGTGCCCT GGTGA
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| Protein sequence | MQDTPSQKTV LLVGASRGLG LAMVEEFLKR GCRVIATGRA ASTEKLLHLA EAFAGALEVD
TVDITIPEQI AALRARLEGR RIDVLFVNAG VVNADRETLA DVSTEEFVRV MVTNSLSPMR
VVNAFQDLVP PTGTIGVMSS GQGSIANATN ANYEVYRGSK AALNMFMRTF AARSAGSPRS
LLLMAPGWVQ TDMGGPTARL TIEESIPNLV DTIEAYEGRA GLHYLDYLGR LVPW
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