| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1881 |
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| Symbol | |
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| ID | 6284301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 2113237 |
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| End bp | 2114883 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642621444 |
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| Product | Protein of unknown function DUF1800 |
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| Protein accession | YP_001895513 |
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| Protein GI | 187923871 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5267] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.126804 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTAAAT TGCACACGCG TGGTAGTTGT GGCCGCAAGT TTGTAGCATC GGCGATTGCC
CTGGCGGTGG TGACGTGGTG TGGGCCCGCC GCCGCCGTGC AACTGGGCAC GGCTCATGTT
CCGCACGCCA GGCACGCTGC GCCGACCGCC GATGAGCATG CCGCTTCGGA GCGTGAACAG
AGCATCCTCG ATGGCGACGA TGCACGCTTC TTCCTGACGC GCGTGGGCTT CGCGCCGGAT
AGCGCCGAGC TCGCGCAATA CGTTGGACTC ACGCGAGCGC AGGCCGTCGA TAAAGTACTC
GCAAGCGCGC GGACCGAGGC AGTCACGCCG CTGCCCGACT GGGTGCTCGA ACCGATTCCG
ACTCGCGAGA CGAAGAAGAC GTGGACCGAC GATCAACGGC GCGACGAGCA GCGACTGCGC
GCGCAGCGTT ACGAATTATT ACGCGCGTGG TGGGTGCGCG AGATGTTGAC CACGCCGTCG
CCGCTCACCG AGCGCATGAC GCTGTTCTGG CATAACCACT TCACCTCGGG TCAGGACAAG
GTCCCGTATC CGCAGCAGAT GGCGCTGCAG AACATGCTGT TGCGGCGCGA TGCGCTCGGC
AACTTCGGCG AGCTATTGCA CGACATTGCG AAAGATCCGG CGATGCTCCA ATACCTCGAC
GGCGCAAGCA ATCGCAAGGG CAAGCCCAAC GAAAATTTCG CCCGTGAAGT GATGGAGCTG
TTCACGCTCG GCGAAGGGCA TTACACGCAG CGCGACGTGT CGGAGGCCGC GCGCGCATAT
ACGGGTTGGA GCCTCGATCC GGACACGCAG GCCTATGTGT GGCGCGCCAA TCAGCACGAC
GACGGCGAGA AGACGGTGCT CGGCGAGACA GGGGCGTTCG ACGGCGATCA GGTGCTCGAT
ATTCTGCTCG CGCGGCCGGA AACGGCCACC TTCGTGACGA GCAAGCTGTG GCGCGAGTTC
GTTTCGGATA CGCCGGACCT TGCGCGCATC GAACCGATTG CGGCGCGCTT TCGCGCAAGC
CACTACGATA TCAAGGTCGC GTTGCGCGGC ATCTTCCTGA GCGACGCGTT CTGGGACGAC
GGCAATCGCG GCGTCCTCGT GAAGTCGCCG GCGGAGTTCG TGGTCGGCAC GCTGCGTGCG
TTCGACATCG GTTATGACAA CACCGCGCCG TTTGCCTCGC AAATCCGCAC GCTCGGCGAG
AACCTGTTCT ATCCGCCGAA CGTCAAAGGA TGGCCGGGCG GCACGACATG GATCAACAGT
TCCACGCTGC TCGCCCGCAA GCAATTCGTC GAGCAACTGT TTCGCGCGAC CGAGGCCGCC
GGTCCGCGGC GCATGACCAA TCCTATGAAC GCAAACGTCG CGGCAAGTGG CACGACACCC
GGGGTGCGGA CGGCTCCCAC GCTGCAACGC ACGACGACGC GAGCCGCTCA ACGCGGCCAA
GGCGGCAAAG GTGGCGTACG CTTCGACATC GAGACATGGC TCGCGCACTA CAACACCGCG
CCGACCGCGA GCCCCGGGTT GTCGGCCGAA TTGCAACTGC AGCATGCGGT CCTGCCGCTC
ACGCCGGTCG ACGCGATCGA AACCGGTTCG ACCGCGAGTG CGTATCTGGA GGCATTGCTG
ATGGACCCGG CGTATCAATT GAAGTGA
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| Protein sequence | MIKLHTRGSC GRKFVASAIA LAVVTWCGPA AAVQLGTAHV PHARHAAPTA DEHAASEREQ
SILDGDDARF FLTRVGFAPD SAELAQYVGL TRAQAVDKVL ASARTEAVTP LPDWVLEPIP
TRETKKTWTD DQRRDEQRLR AQRYELLRAW WVREMLTTPS PLTERMTLFW HNHFTSGQDK
VPYPQQMALQ NMLLRRDALG NFGELLHDIA KDPAMLQYLD GASNRKGKPN ENFAREVMEL
FTLGEGHYTQ RDVSEAARAY TGWSLDPDTQ AYVWRANQHD DGEKTVLGET GAFDGDQVLD
ILLARPETAT FVTSKLWREF VSDTPDLARI EPIAARFRAS HYDIKVALRG IFLSDAFWDD
GNRGVLVKSP AEFVVGTLRA FDIGYDNTAP FASQIRTLGE NLFYPPNVKG WPGGTTWINS
STLLARKQFV EQLFRATEAA GPRRMTNPMN ANVAASGTTP GVRTAPTLQR TTTRAAQRGQ
GGKGGVRFDI ETWLAHYNTA PTASPGLSAE LQLQHAVLPL TPVDAIETGS TASAYLEALL
MDPAYQLK
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