| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1878 |
|---|
| Symbol | |
|---|
| ID | 6283400 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 2110366 |
|---|
| End bp | 2111715 |
|---|
| Gene Length | 1350 bp |
|---|
| Protein Length | 449 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642621441 |
|---|
| Product | integral membrane sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_001895510 |
|---|
| Protein GI | 187923868 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0696296 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.299765 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGATCG ACCGGCGCCT CCTGACGCTC GCGTTCGGCG GCCTTTTCTG GCGGACCTTT
CTGTTGATCG CGCTGTTGAT CGCAGTCAGT CTCGCCGCGT GGTTCCAGAG CTTCCGGGTG
ATCGAACGCG AGCCGCGCGC GCAGCGCGTG GCGTTGCAGC TCGTCGCCAT CGTGAAGCTC
ACGCGCACCG CACTCCTCTA TTCCGATCCC GACCTGCGGC GCGCCCTGCT GCAGGATCTG
GAAAGCAATG AAGGGGTGCG CGTGTACCCG CGCGAAACCA CCGACAAGTA CAAGCTCCAG
CCCGACGAGT CGCTGAACCG GCTGATCGAA CACGACATTC GCGGCCGTCT CGGCGACGAC
ACCGTCATCG CGCAAAGCGT GAACGACATC CCCGGCGTGT GGATCAGCTT CAAGATCGAC
GACGACGACT ACTGGGTCGC GCTCGACCGC GATCAGCTCG ACAACGCCAC CGGTTTGCAA
TGGGCCGGCT GGGGCGTGTT CGCGCTGGCG CTCTCGTTGT TCGGCGCGGC CTTCATCACG
AGTCTCGTGA ACCGTCCGTT CGCGCGCCTC GCCATGGCCG CGCGCAAGGT GGGCTCAGGC
CAGTCGCCCG AGCCGCTGCC CGAGCGCGGC ATGGGCGTGG CCGCGGAAAC CAATCGCAGT
TTCAACCAGA TGGTGCAGGA TCTCGAACAG CTCGAGGCCG ACCGCGCGCT GATGCTCGCG
GGCATCTCGC ACGATCTGCG CACGCCGCTC GCGCGGCTGC GGCTCGAAAC CGAAATGAGC
CCGTCCGATC AGGCCACCAA AGACGCGATG GTCGACGACA TCGAGCAGAT GGACATGATC
ATCGGCCGGT TCCTCGATTA CGCACGCCCG GTACAGCGCG TGCCGGAGCC TGTCGACCTG
TCCGTGATCG CGGGCGAGTT GGCCGCGCGC ATGCAGAGCG AAGACAGCAT GCGCCTGATC
ACGCGGCTCG CGCCGTCGGC GGTGATCGAA GCGGATGAGA CCGACATGCG CCGGGTAGTC
GGCAATCTGC TGGAAAACGC GCGCAAGTAT GGCCTGAGCG ATGGCGACGG CATTCCGCAC
GTGATTCTGG AAACGCGAGT GTCGCACTCG CGGGTCGAGC TCTCGGTGGT CGACGAAGGC
CCGGGCATTC CGGAAGACCA GCTGGCGCTC GTCACACGGC CGTTCTATCG TGTGAATTCG
GCGCGCACCC AGGCGAACGG CACAGGCCTT GGCATGGCCA TCGTCCAGCG CCTCGTGAGC
CGTTACCGCG GCGCGCTGCG CCTGCGCAAT CGCACGCCTG GACCGGGTCT CGAGGTCACC
ATCGAATTTC CGCTTGCCAA AGGCGTCTGA
|
|---|
| Protein sequence | MRIDRRLLTL AFGGLFWRTF LLIALLIAVS LAAWFQSFRV IEREPRAQRV ALQLVAIVKL
TRTALLYSDP DLRRALLQDL ESNEGVRVYP RETTDKYKLQ PDESLNRLIE HDIRGRLGDD
TVIAQSVNDI PGVWISFKID DDDYWVALDR DQLDNATGLQ WAGWGVFALA LSLFGAAFIT
SLVNRPFARL AMAARKVGSG QSPEPLPERG MGVAAETNRS FNQMVQDLEQ LEADRALMLA
GISHDLRTPL ARLRLETEMS PSDQATKDAM VDDIEQMDMI IGRFLDYARP VQRVPEPVDL
SVIAGELAAR MQSEDSMRLI TRLAPSAVIE ADETDMRRVV GNLLENARKY GLSDGDGIPH
VILETRVSHS RVELSVVDEG PGIPEDQLAL VTRPFYRVNS ARTQANGTGL GMAIVQRLVS
RYRGALRLRN RTPGPGLEVT IEFPLAKGV
|
|---|
| |