Gene Bphyt_1877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1877 
Symbol 
ID6283399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp2109658 
End bp2110206 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content58% 
IMG OID642621440 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_001895509 
Protein GI187923867 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0450] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00595547 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.326484 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACTG TCGGCGATAA AGTTGAAGCG TTCACCGTCA CGGCCGCGAA GCCGGGCTTC 
AACCATCATG AAGAGAACGG CATTTCGGCA TTCGAAGACA TCACGGAGCA GTCGTTTCCG
GGCAAATGGA AGATCATCTA TTTCTACCCG AAGGATTTCT CGTTCCTGTG TCCGACGGAG
ATCGTCGAGT TCGGCAAGCT GGCGAGGGAT TTTGAAGACC GCGACGCGGT GTTGATGGGC
GGCAGCGTCG ACAATGAATT CGTGAAGCTG GCATGGCGCC GTGAGCTCAA GGACCTGAAC
AAGCTCAATC ACTATGCCTT CGGCGACGTG AAGGGCGAGC TGATCGACCA GCTCGGTGTG
CGCGACCAGG AAGCGGGTGT CGCGTTGCGC GCCACCTTTA TCATCGATCC GGACAACACG
ATCCAGCATG TGTCGGTGAA CAACCTGAAC GTGGGCCGCA ATCCGGAAGA AGTGCTGCGG
ATTCTGGACG CCCTGCAAAC GGACGAGCAG TGTGCCTGCA ACCGCCCGAT CGGCGGCGCC
ACGCTCTGA
 
Protein sequence
MKTVGDKVEA FTVTAAKPGF NHHEENGISA FEDITEQSFP GKWKIIYFYP KDFSFLCPTE 
IVEFGKLARD FEDRDAVLMG GSVDNEFVKL AWRRELKDLN KLNHYAFGDV KGELIDQLGV
RDQEAGVALR ATFIIDPDNT IQHVSVNNLN VGRNPEEVLR ILDALQTDEQ CACNRPIGGA
TL