| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1868 |
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| Symbol | |
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| ID | 6284196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 2097355 |
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| End bp | 2098974 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642621431 |
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| Product | integral membrane sensor signal transduction histidine kinase |
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| Protein accession | YP_001895500 |
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| Protein GI | 187923858 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.128925 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0899176 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTAT TCACCAAGGG TCTGCTGCTG ATTGCAGTGC CGAGCGCGGT CGAGCTGGCG
CTTCTTGGCG TCGTCTTCGA TACCCAGGAG CAGACAGCGC AGGCCGCCCA GCAGGTCACC
AACAGCAAGC AGATTCTCTA TCAGTCGTCG GCCATCATCG ATCCGCTGCT GCGTCAGGCG
GCGCGGGTTC GCACGGGCAT GGTGATCGGC GATGCGTCGC TGATCGACCG CCATACCGTG
TGGGTCGATC TGGGCGACCG GCTGTCGAAT CTCGAGGTGC TGGTTGCCGG CACGCCGCAT
CAGGTCGAGC GCGTGCACAA GATGCAGCGT GCGATCGACG CGTATCGCAT GCAGACGGTC
GCGATCTCGC AGGCGCTGCA CGAAGGGCGT CGTCTGACTT CGTTTACTGT GCTGGAGACC
GGCGCGTTGC CGCAGCAGAT CGCCGTGTTT CGCGATGAGC TCGCGGCGTT CGGCGACGAG
GCGTCGCGGC TCGATGCCGA GCGCTCGGCC GCGCTCGCGC GGCGCCGTGA CCGCCAGCAG
TACGCGCTGA TCGGTGCCGT GCTGGGCTCG ATGCTGATCT GGGCCGTCAC CGCGGTGGTC
TTTGCGCGCA GCATCGGCCG GCGGCTGGAA GTGTTGACCG AGAATGCCGA GCGTTTAGGC
AGCGGGCGCA CGTTGGCGCC GGCGCTGTCG GGTAAGGACG AAATTGCCGC GCTCGACGCC
GTGCTGCATC AGACGGGCGC GCGCCTGCGT GACGCGGAAG CCGAGCAGGC CATGCTGAAA
ACGCGGCTCG AAGCACGCGC GCGGGAACTG GCGGGCGTCA ACGAGGAACT GCGTCAGGAG
ACGCAAGACA ATGAAATGTT CATCTACAGC GTGTCGCACG ATCTGCGCTC GCCGTTGGTG
AATCTGCAAG GTTTCTCGAA GGAATTGCAG GTCTCATGCG ACGAACTGGA CAGCGTCGTC
GAGGCGGCAA AATTGCCGGA GGCCGAGCAT CGGCGCATGG CGCATATTCT TAACGGCGAG
GTGCGCGAGT CGTTGCAATA TCTGCGCACC GCAGTGACGC GAGCCGCGGC GATCATCGAC
GCGCTGCTGC GCATTTCACG CGCCGGCCGG CTCGAGTATC AGTGGCAGCG CGTGAGCGTC
GGGCGCGTAG TGGGCCGGGT GGTCGACGCG CTGCAAGGCG CGATCGGCCA GCATGCCGCC
GTGGTGACCG TGCGCGACTT GCCGCCCGCA TGGGGCGACC CCGGCGCGAT CGAGCAGATT
TTCAGCAATC TGATCGGCAA CGCGCTGAAT TATCTCGACC CGGCGCGCAA CGGGCGTATC
GAAATCGGCG CACTGGAACC CGAACCGGTC GAGCCGGCCG AGGCAGGTGA GCCGCGCGCG
GTCCGCATGC GCACGTATTA TGTGCGCGAC AACGGCCTCG GCATTCCGGC CGCGTATATG
TCGAAAGTGT TCCGGGCGTT TCAGCGCCTG CACGGCGACG TCGCGAACGG CGATGGCATC
GGTCTCGCGG TGGTGCGTCG TACGGTGGAG CGGCATGGGG GACGCGTGTG GGTCGAGTCG
GCGGAGGGCG CGGGGTCGAC GTTTTTCGTG GTGTTGCCGG AACAGCCCGC GCGTCTGTGA
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| Protein sequence | MKLFTKGLLL IAVPSAVELA LLGVVFDTQE QTAQAAQQVT NSKQILYQSS AIIDPLLRQA
ARVRTGMVIG DASLIDRHTV WVDLGDRLSN LEVLVAGTPH QVERVHKMQR AIDAYRMQTV
AISQALHEGR RLTSFTVLET GALPQQIAVF RDELAAFGDE ASRLDAERSA ALARRRDRQQ
YALIGAVLGS MLIWAVTAVV FARSIGRRLE VLTENAERLG SGRTLAPALS GKDEIAALDA
VLHQTGARLR DAEAEQAMLK TRLEARAREL AGVNEELRQE TQDNEMFIYS VSHDLRSPLV
NLQGFSKELQ VSCDELDSVV EAAKLPEAEH RRMAHILNGE VRESLQYLRT AVTRAAAIID
ALLRISRAGR LEYQWQRVSV GRVVGRVVDA LQGAIGQHAA VVTVRDLPPA WGDPGAIEQI
FSNLIGNALN YLDPARNGRI EIGALEPEPV EPAEAGEPRA VRMRTYYVRD NGLGIPAAYM
SKVFRAFQRL HGDVANGDGI GLAVVRRTVE RHGGRVWVES AEGAGSTFFV VLPEQPARL
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