| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1865 |
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| Symbol | |
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| ID | 6284193 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 2093682 |
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| End bp | 2096180 |
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| Gene Length | 2499 bp |
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| Protein Length | 832 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642621428 |
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| Product | AsmA family protein |
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| Protein accession | YP_001895497 |
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| Protein GI | 187923855 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0704419 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0719659 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGTGT CGAGCACGAC TGGACGGCGG ATCGGAAAAA TCATTGCGTG GCTGCTGGCG
ATTATCGTCA TTCTGATTGT CGCGCTGACT ATTTTCATTC TGACCTTCGA CTGGAACCGG
GCAAGGCCCT ATATCAACGA CAAGGTCACG CAAGCTATCG GCAGGCCGTT CGCCATCAAC
GGCGATCTGA AGGTCGGCTG GCGGCATCCA GTCGGCGAAA CCGGCTGGCG CGGCTGGGTG
CCGTGGCCGC GATTCTCGGC GGCCAATATC ACTGTGGGCA ATCCGGACTG GACGAAGCAG
CCGCACTTCG CCACGCTCGA CGAGATCGAC TTTCAGGTCA AGGTGCTGCC GCTGCTCGCG
CACGATATCG TGATTCCCAC GATCAACCTC GTGAATCCTT CGGTCGATCT CGAACGCGTG
CTCGACGGGC GCAACAACTG GACGTTCAAA CTGGCGTCGT CGAGCGGGCC TTCGGAATGG
AAGCTCGATC TGCACGATAT CGCCTTTGCC AAGGGCAACA TTGCGTTGTC CGATCAGCAG
AAGAAGGTCG ATCTGCAAAT GGCCGTCGAC ACGCTCGGTC AGCCGATTCC GATCGGCGAG
GCGATGAAAC AGCAGGAAGC GGCGTCGCGC AGTTCGTCGG CGCAAACCAT CGGCAAGTCG
GGCGCGAACA AGCTGACGCA ACAGGCGAAT GCGCAGGCGG CATCGGAGGC TGCGGCGGCG
TCCGCGGCGG CGGCTTCGGG CGCGTCGTCG ACGGAGATCA GCGCGTCGGG GACGACGGCG
GCGACGGGCG CCTCGGGTGG CTTGGTCGCG GGCGGTTCCA GGGGGGCGAG CGAAGCCGTC
GCGGCAGGCG CGAGCGGCGC AGTCGTGGCG TCGGCGCCGG CTTCGAGTGC TTCGGGCGCG
AGCGATGCGC AAGCCGGCGC GAAGCAGGAG ATTCCTCCAT ATGCCATCGG CTGGACCGTC
AAAGGGACTT ACAACAAGAC GCCGGTCTCC GGCAGCGGCA AGGTAGGCGG CGTGCTCGCA
TTGCAGGATG CGAACCGGCC GTTCCCGGTC CAGGCCGACG TCAAGGCCGG CGATCTGCAT
GTCGGCCTGG TGGGCACGAT CACCGATCCG GCGCATCTTG CCGCGGTCGA TCTGCGCCTC
TGGCTGCAAG GCAACAGCAT GGCGCGCCTG TATTCGCTGA CCGGTGTGAC CTTGCCCGAC
ACGCCGCCGT ATGCGACCGA AGGGCGGCTC GTCGGCCAGT TCAAGTCCAG CGGCAACGTC
TTCAAGTATG AAAATTTTAC AGGCCGGGTC GGCGGCAGCG ATATCAACGG CTCGCTAACC
TATACGGCAC GTGAACCGCG TCCGCTGCTG CAGGGCGAAC TCGTCTCGCA TCTGCTGCAG
TTCTCCGATC TGGCGCCCGT GATCGGCGCG GATTCGAACG CCAGCAAGGC CAAGCGCGGC
GACGCGACGG CGCAGCCGTC CAACAAGGTG CTGCCCGTCG AGGAATTCCG CACCGACCGC
TGGAAGGCGA TCGACGCCGA CGTGAAGTTC ACCGGCCGGC GCATCGTCAA GGACGTGAAT
CTGCCGATCA CGGATCTGTA CACGCACGTC GTGATGACCG ATGGCGTGCT CTCCCTGGAA
CCGTTGAAGT TCGGCGTGGC CGGCGGCTCG CTCGCCTCGG ACATTCATCT CGATGGCAGC
GCGACGCCGC TCAAGGGCCG CTTCGCGACA TCGGCGCGGC ATCTGAAGCT CAAACAGCTG
TTCCCGAACT TCAAGACCAT GCAGAACGCG CTCGGTGAAA TCAACGGCGA CGCCGCGCTG
ACCGCGACGG GCAATTCGCC GGCGGCGCTT GCGGCATCGT CGAACGGCGA GGTGAAGGCA
TTGGTGACGG ACGGCACGGT GAGCCGTCTG CTGATGGAAG CGGCGGGGCT GAACGTGGCG
AATGTCGTCT ACGAAAAGCT GTTCGGCAAT CGCGACGTGA AGATCAACTG CGCGGCCGCC
GATTTTGTCG CAACCAACGG CGTGCTCGAA TCGCGCGTCT TCGCGCTCGA TACGGACGAC
GCCGTGATCA ATATCGACGG CAACGTGAAT CTGCGCGACG AGTCGATGGA CCTCGGCGTG
CATCCGCATA CCAAGGGCTT CCGTGTTTTC TCGCTGCGTT CGCCGCTATA CGTGAAAGGC
ACCTTCAAGG ATCCGCACGT GGGCGTGAAT GCGGCCGCGC TGGCGCTGCG CGGTGGCGCG
GCGGTCGGCC TCGGCTTGAT CAATCCGTTC GCGGCGCTGA TTCCGTTGCT CGCGCCGAGC
AACAACAAGC CGTTGCCCTG CACGCAGATG CTGGAACAGA TCCGTCAGGC GCCGACGGCG
CCGCCGCCGG GCGTGAAGCA GCAGCCCAAG GCGGCGATCT CTCTGGATGG CGCGCCGGTC
AATAAGTCTT CGGGCGGTGC TTCGTCGCCG GCCGCGACGG ATAAGAAGAA GCCGGCGGTG
ATGTCGCCCG CCAGCGCGGC TACTTACAAG GGAAGCTGA
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| Protein sequence | MAVSSTTGRR IGKIIAWLLA IIVILIVALT IFILTFDWNR ARPYINDKVT QAIGRPFAIN
GDLKVGWRHP VGETGWRGWV PWPRFSAANI TVGNPDWTKQ PHFATLDEID FQVKVLPLLA
HDIVIPTINL VNPSVDLERV LDGRNNWTFK LASSSGPSEW KLDLHDIAFA KGNIALSDQQ
KKVDLQMAVD TLGQPIPIGE AMKQQEAASR SSSAQTIGKS GANKLTQQAN AQAASEAAAA
SAAAASGASS TEISASGTTA ATGASGGLVA GGSRGASEAV AAGASGAVVA SAPASSASGA
SDAQAGAKQE IPPYAIGWTV KGTYNKTPVS GSGKVGGVLA LQDANRPFPV QADVKAGDLH
VGLVGTITDP AHLAAVDLRL WLQGNSMARL YSLTGVTLPD TPPYATEGRL VGQFKSSGNV
FKYENFTGRV GGSDINGSLT YTAREPRPLL QGELVSHLLQ FSDLAPVIGA DSNASKAKRG
DATAQPSNKV LPVEEFRTDR WKAIDADVKF TGRRIVKDVN LPITDLYTHV VMTDGVLSLE
PLKFGVAGGS LASDIHLDGS ATPLKGRFAT SARHLKLKQL FPNFKTMQNA LGEINGDAAL
TATGNSPAAL AASSNGEVKA LVTDGTVSRL LMEAAGLNVA NVVYEKLFGN RDVKINCAAA
DFVATNGVLE SRVFALDTDD AVINIDGNVN LRDESMDLGV HPHTKGFRVF SLRSPLYVKG
TFKDPHVGVN AAALALRGGA AVGLGLINPF AALIPLLAPS NNKPLPCTQM LEQIRQAPTA
PPPGVKQQPK AAISLDGAPV NKSSGGASSP AATDKKKPAV MSPASAATYK GS
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